Protein–RNA interactions for Protein: P0DJI8

SAA1, Serum amyloid A-1 protein, humanhuman

Predicted RBP Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA1P0DJI8 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC17.17■□□□□ 0.34
SAA1P0DJI8 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC17.17■□□□□ 0.34
SAA1P0DJI8 AC024257.2-201ENST00000549699 147 ntBASIC17.17■□□□□ 0.34
SAA1P0DJI8 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SAA1P0DJI8 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC17.17■□□□□ 0.34
SAA1P0DJI8 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC17.17■□□□□ 0.34
SAA1P0DJI8 AL136162.1-201ENST00000607711 1078 ntBASIC17.17■□□□□ 0.34
SAA1P0DJI8 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC17.17■□□□□ 0.34
SAA1P0DJI8 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SAA1P0DJI8 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC17.17■□□□□ 0.34
SAA1P0DJI8 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC17.16■□□□□ 0.34
SAA1P0DJI8 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SAA1P0DJI8 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
SAA1P0DJI8 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SAA1P0DJI8 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
SAA1P0DJI8 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SAA1P0DJI8 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SAA1P0DJI8 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
SAA1P0DJI8 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC17.16■□□□□ 0.34
SAA1P0DJI8 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SAA1P0DJI8 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
SAA1P0DJI8 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SAA1P0DJI8 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SAA1P0DJI8 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
SAA1P0DJI8 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SAA1P0DJI8 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC17.16■□□□□ 0.34
SAA1P0DJI8 AC135279.3-201ENST00000610945 1311 ntBASIC17.16■□□□□ 0.34
SAA1P0DJI8 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC17.16■□□□□ 0.34
SAA1P0DJI8 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SAA1P0DJI8 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SAA1P0DJI8 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SAA1P0DJI8 AC005229.4-201ENST00000610085 2198 ntBASIC17.15■□□□□ 0.34
SAA1P0DJI8 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SAA1P0DJI8 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC17.15■□□□□ 0.34
SAA1P0DJI8 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC17.15■□□□□ 0.34
SAA1P0DJI8 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC17.15■□□□□ 0.34
SAA1P0DJI8 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC17.15■□□□□ 0.34
SAA1P0DJI8 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC17.15■□□□□ 0.34
SAA1P0DJI8 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC17.15■□□□□ 0.34
SAA1P0DJI8 AC008406.3-201ENST00000620001 1374 ntBASIC17.15■□□□□ 0.34
SAA1P0DJI8 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
SAA1P0DJI8 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC17.14■□□□□ 0.34
SAA1P0DJI8 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.34
SAA1P0DJI8 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
SAA1P0DJI8 PALM-208ENST00000592155 2272 ntTSL 4 BASIC17.14■□□□□ 0.33
SAA1P0DJI8 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SAA1P0DJI8 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC17.14■□□□□ 0.33
SAA1P0DJI8 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SAA1P0DJI8 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SAA1P0DJI8 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC17.14■□□□□ 0.33
SAA1P0DJI8 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SAA1P0DJI8 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SAA1P0DJI8 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
SAA1P0DJI8 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC17.14■□□□□ 0.33
SAA1P0DJI8 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC17.14■□□□□ 0.33
SAA1P0DJI8 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SAA1P0DJI8 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SAA1P0DJI8 AC233992.3-201ENST00000607491 485 ntBASIC17.14■□□□□ 0.33
SAA1P0DJI8 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SAA1P0DJI8 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SAA1P0DJI8 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SAA1P0DJI8 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SAA1P0DJI8 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SAA1P0DJI8 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SAA1P0DJI8 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SAA1P0DJI8 MFF-203ENST00000349901 1716 ntTSL 2 BASIC17.13■□□□□ 0.33
SAA1P0DJI8 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SAA1P0DJI8 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SAA1P0DJI8 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SAA1P0DJI8 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SAA1P0DJI8 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC17.13■□□□□ 0.33
SAA1P0DJI8 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC17.13■□□□□ 0.33
SAA1P0DJI8 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC17.13■□□□□ 0.33
SAA1P0DJI8 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC17.13■□□□□ 0.33
SAA1P0DJI8 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC17.13■□□□□ 0.33
SAA1P0DJI8 AC126544.1-201ENST00000580842 1059 ntBASIC17.13■□□□□ 0.33
SAA1P0DJI8 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SAA1P0DJI8 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC17.13■□□□□ 0.33
SAA1P0DJI8 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SAA1P0DJI8 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SAA1P0DJI8 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SAA1P0DJI8 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SAA1P0DJI8 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
SAA1P0DJI8 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SAA1P0DJI8 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SAA1P0DJI8 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SAA1P0DJI8 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SAA1P0DJI8 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SAA1P0DJI8 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC17.12■□□□□ 0.33
SAA1P0DJI8 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC17.12■□□□□ 0.33
SAA1P0DJI8 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SAA1P0DJI8 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SAA1P0DJI8 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
SAA1P0DJI8 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SAA1P0DJI8 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
SAA1P0DJI8 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SAA1P0DJI8 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC17.12■□□□□ 0.33
SAA1P0DJI8 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SAA1P0DJI8 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
SAA1P0DJI8 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms