Protein–RNA interactions for Protein: P0CI26

TRIM49C, Tripartite motif-containing protein 49C, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49CP0CI26 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
TRIM49CP0CI26 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC23.2■■□□□ 1.3
TRIM49CP0CI26 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TRIM49CP0CI26 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
TRIM49CP0CI26 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC23.2■■□□□ 1.3
TRIM49CP0CI26 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC23.2■■□□□ 1.3
TRIM49CP0CI26 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
TRIM49CP0CI26 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TRIM49CP0CI26 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC23.2■■□□□ 1.3
TRIM49CP0CI26 AC003102.1-202ENST00000563394 1796 ntBASIC23.19■■□□□ 1.3
TRIM49CP0CI26 BX005040.4-201ENST00000637145 1518 ntBASIC23.19■■□□□ 1.3
TRIM49CP0CI26 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TRIM49CP0CI26 IRS3P-201ENST00000223076 1006 ntBASIC23.19■■□□□ 1.3
TRIM49CP0CI26 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC23.19■■□□□ 1.3
TRIM49CP0CI26 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC23.19■■□□□ 1.3
TRIM49CP0CI26 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC23.19■■□□□ 1.3
TRIM49CP0CI26 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC23.19■■□□□ 1.3
TRIM49CP0CI26 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC23.19■■□□□ 1.3
TRIM49CP0CI26 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
TRIM49CP0CI26 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TRIM49CP0CI26 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
TRIM49CP0CI26 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
TRIM49CP0CI26 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TRIM49CP0CI26 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TRIM49CP0CI26 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TRIM49CP0CI26 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
TRIM49CP0CI26 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TRIM49CP0CI26 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
TRIM49CP0CI26 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC23.18■■□□□ 1.3
TRIM49CP0CI26 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC23.18■■□□□ 1.3
TRIM49CP0CI26 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
TRIM49CP0CI26 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
TRIM49CP0CI26 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC23.18■■□□□ 1.3
TRIM49CP0CI26 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TRIM49CP0CI26 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TRIM49CP0CI26 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TRIM49CP0CI26 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TRIM49CP0CI26 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
TRIM49CP0CI26 MPST-204ENST00000404393 1329 ntTSL 5 BASIC23.17■■□□□ 1.3
TRIM49CP0CI26 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TRIM49CP0CI26 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TRIM49CP0CI26 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TRIM49CP0CI26 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TRIM49CP0CI26 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TRIM49CP0CI26 ZNRF2P3-201ENST00000424200 374 ntBASIC23.17■■□□□ 1.3
TRIM49CP0CI26 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TRIM49CP0CI26 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC23.17■■□□□ 1.3
TRIM49CP0CI26 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC23.17■■□□□ 1.3
TRIM49CP0CI26 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC23.16■■□□□ 1.3
TRIM49CP0CI26 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
TRIM49CP0CI26 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
TRIM49CP0CI26 AC244015.2-201ENST00000616358 1861 ntBASIC23.16■■□□□ 1.3
TRIM49CP0CI26 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TRIM49CP0CI26 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
TRIM49CP0CI26 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TRIM49CP0CI26 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TRIM49CP0CI26 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TRIM49CP0CI26 NME4-202ENST00000382940 766 ntTSL 3 BASIC23.16■■□□□ 1.3
TRIM49CP0CI26 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TRIM49CP0CI26 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC23.16■■□□□ 1.3
TRIM49CP0CI26 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
TRIM49CP0CI26 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC23.16■■□□□ 1.3
TRIM49CP0CI26 AL354811.1-201ENST00000610286 706 ntBASIC23.16■■□□□ 1.3
TRIM49CP0CI26 NME4-211ENST00000620944 1193 ntTSL 2 BASIC23.16■■□□□ 1.3
TRIM49CP0CI26 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TRIM49CP0CI26 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TRIM49CP0CI26 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TRIM49CP0CI26 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TRIM49CP0CI26 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC23.15■■□□□ 1.3
TRIM49CP0CI26 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TRIM49CP0CI26 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
TRIM49CP0CI26 NT5C3AP1-201ENST00000394500 1012 ntBASIC23.15■■□□□ 1.3
TRIM49CP0CI26 AC005224.4-201ENST00000583262 1652 ntBASIC23.15■■□□□ 1.3
TRIM49CP0CI26 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TRIM49CP0CI26 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TRIM49CP0CI26 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC23.14■■□□□ 1.3
TRIM49CP0CI26 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC23.14■■□□□ 1.3
TRIM49CP0CI26 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
TRIM49CP0CI26 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TRIM49CP0CI26 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC23.14■■□□□ 1.29
TRIM49CP0CI26 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC23.14■■□□□ 1.29
TRIM49CP0CI26 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC23.14■■□□□ 1.29
TRIM49CP0CI26 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
TRIM49CP0CI26 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC23.14■■□□□ 1.29
TRIM49CP0CI26 AL358852.1-201ENST00000623174 1268 ntBASIC23.14■■□□□ 1.29
TRIM49CP0CI26 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
TRIM49CP0CI26 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
TRIM49CP0CI26 AC009237.3-201ENST00000393279 1427 ntBASIC23.14■■□□□ 1.29
TRIM49CP0CI26 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC23.14■■□□□ 1.29
TRIM49CP0CI26 AC055733.4-201ENST00000638462 1354 ntBASIC23.14■■□□□ 1.29
TRIM49CP0CI26 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
TRIM49CP0CI26 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
TRIM49CP0CI26 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC23.13■■□□□ 1.29
TRIM49CP0CI26 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
TRIM49CP0CI26 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TRIM49CP0CI26 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC23.13■■□□□ 1.29
TRIM49CP0CI26 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
TRIM49CP0CI26 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC23.13■■□□□ 1.29
TRIM49CP0CI26 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC23.13■■□□□ 1.29
TRIM49CP0CI26 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms