Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.9■□□□□ 0.78
PDGFAP04085 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDGFAP04085 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
PDGFAP04085 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.9■□□□□ 0.78
PDGFAP04085 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDGFAP04085 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.9■□□□□ 0.78
PDGFAP04085 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.9■□□□□ 0.78
PDGFAP04085 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDGFAP04085 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
PDGFAP04085 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDGFAP04085 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
PDGFAP04085 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDGFAP04085 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDGFAP04085 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.89■□□□□ 0.78
PDGFAP04085 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
PDGFAP04085 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PDGFAP04085 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.89■□□□□ 0.77
PDGFAP04085 DUSP8P3-201ENST00000399571 1760 ntBASIC19.89■□□□□ 0.77
PDGFAP04085 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.89■□□□□ 0.77
PDGFAP04085 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDGFAP04085 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.89■□□□□ 0.77
PDGFAP04085 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.89■□□□□ 0.77
PDGFAP04085 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.89■□□□□ 0.77
PDGFAP04085 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.89■□□□□ 0.77
PDGFAP04085 ABCB10P4-201ENST00000566803 2184 ntBASIC19.89■□□□□ 0.77
PDGFAP04085 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.89■□□□□ 0.77
PDGFAP04085 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
PDGFAP04085 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.89■□□□□ 0.77
PDGFAP04085 C1orf229-201ENST00000623686 2258 ntBASIC19.88■□□□□ 0.77
PDGFAP04085 LINC01124-201ENST00000409786 2117 ntBASIC19.88■□□□□ 0.77
PDGFAP04085 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDGFAP04085 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
PDGFAP04085 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDGFAP04085 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PDGFAP04085 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.88■□□□□ 0.77
PDGFAP04085 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.88■□□□□ 0.77
PDGFAP04085 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.88■□□□□ 0.77
PDGFAP04085 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.88■□□□□ 0.77
PDGFAP04085 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PDGFAP04085 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.88■□□□□ 0.77
PDGFAP04085 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PDGFAP04085 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDGFAP04085 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
PDGFAP04085 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.87■□□□□ 0.77
PDGFAP04085 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.87■□□□□ 0.77
PDGFAP04085 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDGFAP04085 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
PDGFAP04085 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
PDGFAP04085 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.87■□□□□ 0.77
PDGFAP04085 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
PDGFAP04085 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDGFAP04085 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDGFAP04085 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.86■□□□□ 0.77
PDGFAP04085 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDGFAP04085 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PDGFAP04085 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDGFAP04085 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PDGFAP04085 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
PDGFAP04085 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PDGFAP04085 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PDGFAP04085 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDGFAP04085 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDGFAP04085 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDGFAP04085 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.86■□□□□ 0.77
PDGFAP04085 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDGFAP04085 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PDGFAP04085 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.86■□□□□ 0.77
PDGFAP04085 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.86■□□□□ 0.77
PDGFAP04085 MYCNOS-205ENST00000641950 531 ntBASIC19.86■□□□□ 0.77
PDGFAP04085 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.86■□□□□ 0.77
PDGFAP04085 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDGFAP04085 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PDGFAP04085 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.86■□□□□ 0.77
PDGFAP04085 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.86■□□□□ 0.77
PDGFAP04085 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PDGFAP04085 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PDGFAP04085 AC009237.3-201ENST00000393279 1427 ntBASIC19.85■□□□□ 0.77
PDGFAP04085 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
PDGFAP04085 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PDGFAP04085 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.85■□□□□ 0.77
PDGFAP04085 AC069152.1-201ENST00000438030 544 ntBASIC19.85■□□□□ 0.77
PDGFAP04085 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.85■□□□□ 0.77
PDGFAP04085 AP001160.3-201ENST00000601484 763 ntBASIC19.85■□□□□ 0.77
PDGFAP04085 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
PDGFAP04085 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
PDGFAP04085 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
PDGFAP04085 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PDGFAP04085 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDGFAP04085 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDGFAP04085 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
PDGFAP04085 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDGFAP04085 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDGFAP04085 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.84■□□□□ 0.77
PDGFAP04085 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PDGFAP04085 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDGFAP04085 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.84■□□□□ 0.77
PDGFAP04085 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDGFAP04085 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
PDGFAP04085 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.84■□□□□ 0.77
PDGFAP04085 AC098934.4-201ENST00000564127 592 ntBASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms