Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
HLA-DQA2P01906 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
HLA-DQA2P01906 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HLA-DQA2P01906 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.11■□□□□ 0.65
HLA-DQA2P01906 AC244015.2-201ENST00000616358 1861 ntBASIC19.11■□□□□ 0.65
HLA-DQA2P01906 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
HLA-DQA2P01906 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
HLA-DQA2P01906 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
HLA-DQA2P01906 AC026310.3-201ENST00000625186 2373 ntBASIC19.11■□□□□ 0.65
HLA-DQA2P01906 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HLA-DQA2P01906 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
HLA-DQA2P01906 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.1■□□□□ 0.65
HLA-DQA2P01906 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.1■□□□□ 0.65
HLA-DQA2P01906 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
HLA-DQA2P01906 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DQA2P01906 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DQA2P01906 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.1■□□□□ 0.65
HLA-DQA2P01906 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DQA2P01906 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DQA2P01906 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DQA2P01906 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DQA2P01906 SERBP1P1-201ENST00000396021 1160 ntBASIC19.1■□□□□ 0.65
HLA-DQA2P01906 AC010141.3-201ENST00000456659 717 ntBASIC19.1■□□□□ 0.65
HLA-DQA2P01906 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.1■□□□□ 0.65
HLA-DQA2P01906 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.1■□□□□ 0.65
HLA-DQA2P01906 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.1■□□□□ 0.65
HLA-DQA2P01906 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DQA2P01906 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DQA2P01906 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
HLA-DQA2P01906 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DQA2P01906 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DQA2P01906 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.1■□□□□ 0.65
HLA-DQA2P01906 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
HLA-DQA2P01906 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.09■□□□□ 0.65
HLA-DQA2P01906 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
HLA-DQA2P01906 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
HLA-DQA2P01906 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
HLA-DQA2P01906 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HLA-DQA2P01906 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HLA-DQA2P01906 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
HLA-DQA2P01906 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.09■□□□□ 0.65
HLA-DQA2P01906 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
HLA-DQA2P01906 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HLA-DQA2P01906 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HLA-DQA2P01906 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
HLA-DQA2P01906 AL138724.1-201ENST00000606771 1088 ntBASIC19.09■□□□□ 0.65
HLA-DQA2P01906 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
HLA-DQA2P01906 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
HLA-DQA2P01906 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HLA-DQA2P01906 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HLA-DQA2P01906 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
HLA-DQA2P01906 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HLA-DQA2P01906 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HLA-DQA2P01906 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
HLA-DQA2P01906 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HLA-DQA2P01906 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
HLA-DQA2P01906 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.08■□□□□ 0.65
HLA-DQA2P01906 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HLA-DQA2P01906 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HLA-DQA2P01906 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
HLA-DQA2P01906 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.65
HLA-DQA2P01906 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
HLA-DQA2P01906 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
HLA-DQA2P01906 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HLA-DQA2P01906 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
HLA-DQA2P01906 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
HLA-DQA2P01906 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.08■□□□□ 0.64
HLA-DQA2P01906 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HLA-DQA2P01906 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HLA-DQA2P01906 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HLA-DQA2P01906 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HLA-DQA2P01906 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HLA-DQA2P01906 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HLA-DQA2P01906 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.07■□□□□ 0.64
HLA-DQA2P01906 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.07■□□□□ 0.64
HLA-DQA2P01906 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HLA-DQA2P01906 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.07■□□□□ 0.64
HLA-DQA2P01906 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.07■□□□□ 0.64
HLA-DQA2P01906 AC131281.2-201ENST00000520478 145 ntBASIC19.07■□□□□ 0.64
HLA-DQA2P01906 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HLA-DQA2P01906 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.07■□□□□ 0.64
HLA-DQA2P01906 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HLA-DQA2P01906 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HLA-DQA2P01906 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HLA-DQA2P01906 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.07■□□□□ 0.64
HLA-DQA2P01906 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
HLA-DQA2P01906 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HLA-DQA2P01906 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
HLA-DQA2P01906 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.06■□□□□ 0.64
HLA-DQA2P01906 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HLA-DQA2P01906 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HLA-DQA2P01906 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HLA-DQA2P01906 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.06■□□□□ 0.64
HLA-DQA2P01906 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HLA-DQA2P01906 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HLA-DQA2P01906 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HLA-DQA2P01906 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.06■□□□□ 0.64
HLA-DQA2P01906 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HLA-DQA2P01906 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.06■□□□□ 0.64
HLA-DQA2P01906 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms