Protein–RNA interactions for Protein: P01138

NGF, Beta-nerve growth factor, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NGFP01138 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NGFP01138 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NGFP01138 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NGFP01138 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
NGFP01138 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
NGFP01138 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NGFP01138 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.5■□□□□ 0.55
NGFP01138 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NGFP01138 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.5■□□□□ 0.55
NGFP01138 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
NGFP01138 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.5■□□□□ 0.55
NGFP01138 FBXW4P1-201ENST00000426721 2239 ntBASIC18.5■□□□□ 0.55
NGFP01138 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NGFP01138 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
NGFP01138 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NGFP01138 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
NGFP01138 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.49■□□□□ 0.55
NGFP01138 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NGFP01138 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NGFP01138 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NGFP01138 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NGFP01138 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
NGFP01138 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NGFP01138 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.49■□□□□ 0.55
NGFP01138 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NGFP01138 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.49■□□□□ 0.55
NGFP01138 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NGFP01138 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
NGFP01138 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NGFP01138 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NGFP01138 AC009237.3-201ENST00000393279 1427 ntBASIC18.49■□□□□ 0.55
NGFP01138 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.48■□□□□ 0.55
NGFP01138 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
NGFP01138 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
NGFP01138 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NGFP01138 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.48■□□□□ 0.55
NGFP01138 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NGFP01138 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NGFP01138 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
NGFP01138 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NGFP01138 AC010542.4-201ENST00000563151 1910 ntBASIC18.48■□□□□ 0.55
NGFP01138 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NGFP01138 AP006587.3-201ENST00000525742 1516 ntBASIC18.48■□□□□ 0.55
NGFP01138 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
NGFP01138 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
NGFP01138 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NGFP01138 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NGFP01138 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NGFP01138 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NGFP01138 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NGFP01138 AC027612.3-201ENST00000413684 1047 ntBASIC18.47■□□□□ 0.55
NGFP01138 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NGFP01138 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
NGFP01138 TPRG1LP1-201ENST00000598702 760 ntBASIC18.47■□□□□ 0.55
NGFP01138 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.47■□□□□ 0.55
NGFP01138 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.47■□□□□ 0.55
NGFP01138 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NGFP01138 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.47■□□□□ 0.55
NGFP01138 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NGFP01138 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
NGFP01138 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NGFP01138 AC005224.4-201ENST00000583262 1652 ntBASIC18.47■□□□□ 0.55
NGFP01138 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.47■□□□□ 0.55
NGFP01138 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NGFP01138 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.47■□□□□ 0.55
NGFP01138 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.46■□□□□ 0.55
NGFP01138 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
NGFP01138 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.46■□□□□ 0.55
NGFP01138 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NGFP01138 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.46■□□□□ 0.55
NGFP01138 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NGFP01138 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.46■□□□□ 0.55
NGFP01138 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NGFP01138 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
NGFP01138 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
NGFP01138 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NGFP01138 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NGFP01138 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
NGFP01138 AC055733.4-201ENST00000638462 1354 ntBASIC18.45■□□□□ 0.54
NGFP01138 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NGFP01138 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
NGFP01138 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.45■□□□□ 0.54
NGFP01138 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.45■□□□□ 0.54
NGFP01138 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.45■□□□□ 0.54
NGFP01138 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.45■□□□□ 0.54
NGFP01138 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.45■□□□□ 0.54
NGFP01138 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
NGFP01138 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.45■□□□□ 0.54
NGFP01138 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NGFP01138 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.45■□□□□ 0.54
NGFP01138 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NGFP01138 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NGFP01138 AC003102.1-202ENST00000563394 1796 ntBASIC18.45■□□□□ 0.54
NGFP01138 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NGFP01138 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NGFP01138 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NGFP01138 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NGFP01138 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.44■□□□□ 0.54
NGFP01138 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.44■□□□□ 0.54
NGFP01138 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms