Protein–RNA interactions for Protein: P00558

PGK1, Phosphoglycerate kinase 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1P00558 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PGK1P00558 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC23.9■■□□□ 1.42
PGK1P00558 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC23.9■■□□□ 1.42
PGK1P00558 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
PGK1P00558 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PGK1P00558 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PGK1P00558 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
PGK1P00558 BX276092.2-201ENST00000417668 665 ntBASIC23.9■■□□□ 1.42
PGK1P00558 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC23.9■■□□□ 1.42
PGK1P00558 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC23.9■■□□□ 1.42
PGK1P00558 RARRES2P4-201ENST00000514074 484 ntBASIC23.9■■□□□ 1.42
PGK1P00558 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC23.9■■□□□ 1.42
PGK1P00558 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC23.9■■□□□ 1.42
PGK1P00558 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC23.9■■□□□ 1.42
PGK1P00558 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC23.9■■□□□ 1.42
PGK1P00558 AC069236.1-201ENST00000604339 616 ntBASIC23.9■■□□□ 1.42
PGK1P00558 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.9■■□□□ 1.42
PGK1P00558 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PGK1P00558 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC23.89■■□□□ 1.42
PGK1P00558 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
PGK1P00558 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.41
PGK1P00558 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
PGK1P00558 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
PGK1P00558 AL512625.2-201ENST00000417533 625 ntBASIC23.89■■□□□ 1.41
PGK1P00558 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC23.89■■□□□ 1.41
PGK1P00558 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC23.89■■□□□ 1.41
PGK1P00558 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC23.89■■□□□ 1.41
PGK1P00558 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC23.89■■□□□ 1.41
PGK1P00558 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
PGK1P00558 AL034346.1-201ENST00000568244 1277 ntBASIC23.89■■□□□ 1.41
PGK1P00558 AC083880.1-201ENST00000608266 535 ntBASIC23.89■■□□□ 1.41
PGK1P00558 PKM-204ENST00000449901 2526 ntTSL 2 BASIC23.89■■□□□ 1.41
PGK1P00558 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
PGK1P00558 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
PGK1P00558 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
PGK1P00558 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC23.89■■□□□ 1.41
PGK1P00558 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
PGK1P00558 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.41
PGK1P00558 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PGK1P00558 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PGK1P00558 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PGK1P00558 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PGK1P00558 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC23.88■■□□□ 1.41
PGK1P00558 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC23.88■■□□□ 1.41
PGK1P00558 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PGK1P00558 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PGK1P00558 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
PGK1P00558 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PGK1P00558 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PGK1P00558 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
PGK1P00558 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
PGK1P00558 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PGK1P00558 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC23.87■■□□□ 1.41
PGK1P00558 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
PGK1P00558 AC098590.1-201ENST00000468126 897 ntBASIC23.87■■□□□ 1.41
PGK1P00558 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC23.87■■□□□ 1.41
PGK1P00558 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC23.87■■□□□ 1.41
PGK1P00558 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PGK1P00558 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PGK1P00558 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PGK1P00558 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
PGK1P00558 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
PGK1P00558 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
PGK1P00558 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PGK1P00558 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PGK1P00558 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PGK1P00558 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
PGK1P00558 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
PGK1P00558 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC23.86■■□□□ 1.41
PGK1P00558 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PGK1P00558 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC23.85■■□□□ 1.41
PGK1P00558 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC23.85■■□□□ 1.41
PGK1P00558 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PGK1P00558 DUSP5P2-201ENST00000426873 1033 ntBASIC23.85■■□□□ 1.41
PGK1P00558 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PGK1P00558 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC23.85■■□□□ 1.41
PGK1P00558 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC23.85■■□□□ 1.41
PGK1P00558 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PGK1P00558 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
PGK1P00558 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC23.85■■□□□ 1.41
PGK1P00558 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PGK1P00558 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC23.84■■□□□ 1.41
PGK1P00558 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC23.84■■□□□ 1.41
PGK1P00558 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PGK1P00558 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC23.84■■□□□ 1.41
PGK1P00558 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC23.84■■□□□ 1.41
PGK1P00558 ESRRAP1-201ENST00000400596 1257 ntBASIC23.84■■□□□ 1.41
PGK1P00558 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC23.84■■□□□ 1.41
PGK1P00558 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC23.84■■□□□ 1.41
PGK1P00558 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC23.84■■□□□ 1.41
PGK1P00558 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PGK1P00558 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
PGK1P00558 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
PGK1P00558 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.84■■□□□ 1.41
PGK1P00558 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC23.83■■□□□ 1.41
PGK1P00558 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PGK1P00558 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PGK1P00558 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PGK1P00558 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
PGK1P00558 RHEB-204ENST00000472642 900 ntTSL 3 BASIC23.83■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms