Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC24.67■■□□□ 1.54
ALDH1A1P00352 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
ALDH1A1P00352 OR2A1-AS1-201ENST00000462305 773 ntBASIC24.67■■□□□ 1.54
ALDH1A1P00352 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC24.67■■□□□ 1.54
ALDH1A1P00352 PBX1-209ENST00000485769 834 ntTSL 2 BASIC24.67■■□□□ 1.54
ALDH1A1P00352 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC24.67■■□□□ 1.54
ALDH1A1P00352 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC24.67■■□□□ 1.54
ALDH1A1P00352 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC24.67■■□□□ 1.54
ALDH1A1P00352 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC24.67■■□□□ 1.54
ALDH1A1P00352 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC24.67■■□□□ 1.54
ALDH1A1P00352 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC24.67■■□□□ 1.54
ALDH1A1P00352 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
ALDH1A1P00352 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
ALDH1A1P00352 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
ALDH1A1P00352 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
ALDH1A1P00352 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
ALDH1A1P00352 GXYLT1P3-201ENST00000453058 1193 ntBASIC24.66■■□□□ 1.54
ALDH1A1P00352 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC24.66■■□□□ 1.54
ALDH1A1P00352 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC24.66■■□□□ 1.54
ALDH1A1P00352 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC24.66■■□□□ 1.54
ALDH1A1P00352 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC24.66■■□□□ 1.54
ALDH1A1P00352 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC24.66■■□□□ 1.54
ALDH1A1P00352 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
ALDH1A1P00352 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
ALDH1A1P00352 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
ALDH1A1P00352 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
ALDH1A1P00352 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
ALDH1A1P00352 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
ALDH1A1P00352 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
ALDH1A1P00352 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
ALDH1A1P00352 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC24.65■■□□□ 1.54
ALDH1A1P00352 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
ALDH1A1P00352 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC24.65■■□□□ 1.54
ALDH1A1P00352 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC24.65■■□□□ 1.54
ALDH1A1P00352 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
ALDH1A1P00352 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
ALDH1A1P00352 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
ALDH1A1P00352 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
ALDH1A1P00352 LSM12P1-201ENST00000411836 588 ntBASIC24.64■■□□□ 1.54
ALDH1A1P00352 POU5F1P4-201ENST00000413175 1085 ntBASIC24.64■■□□□ 1.54
ALDH1A1P00352 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC24.64■■□□□ 1.54
ALDH1A1P00352 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC24.64■■□□□ 1.54
ALDH1A1P00352 FAM197Y4-202ENST00000622692 608 ntBASIC24.64■■□□□ 1.54
ALDH1A1P00352 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC24.64■■□□□ 1.53
ALDH1A1P00352 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
ALDH1A1P00352 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
ALDH1A1P00352 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
ALDH1A1P00352 AC142381.3-201ENST00000568208 1670 ntBASIC24.63■■□□□ 1.53
ALDH1A1P00352 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
ALDH1A1P00352 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
ALDH1A1P00352 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
ALDH1A1P00352 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
ALDH1A1P00352 RNF121-214ENST00000533380 870 ntTSL 3 BASIC24.63■■□□□ 1.53
ALDH1A1P00352 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC24.63■■□□□ 1.53
ALDH1A1P00352 REXO1L12P-201ENST00000622156 912 ntBASIC24.63■■□□□ 1.53
ALDH1A1P00352 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC24.63■■□□□ 1.53
ALDH1A1P00352 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC24.63■■□□□ 1.53
ALDH1A1P00352 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC24.62■■□□□ 1.53
ALDH1A1P00352 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
ALDH1A1P00352 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC24.62■■□□□ 1.53
ALDH1A1P00352 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
ALDH1A1P00352 GATS-209ENST00000454084 1030 ntTSL 3 BASIC24.62■■□□□ 1.53
ALDH1A1P00352 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC24.62■■□□□ 1.53
ALDH1A1P00352 AC010331.1-201ENST00000611423 582 ntBASIC24.62■■□□□ 1.53
ALDH1A1P00352 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC24.62■■□□□ 1.53
ALDH1A1P00352 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
ALDH1A1P00352 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC24.62■■□□□ 1.53
ALDH1A1P00352 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC24.62■■□□□ 1.53
ALDH1A1P00352 AL139125.2-201ENST00000623134 1869 ntBASIC24.62■■□□□ 1.53
ALDH1A1P00352 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC24.61■■□□□ 1.53
ALDH1A1P00352 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
ALDH1A1P00352 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
ALDH1A1P00352 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
ALDH1A1P00352 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC24.61■■□□□ 1.53
ALDH1A1P00352 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
ALDH1A1P00352 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
ALDH1A1P00352 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC24.61■■□□□ 1.53
ALDH1A1P00352 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC24.61■■□□□ 1.53
ALDH1A1P00352 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
ALDH1A1P00352 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC24.61■■□□□ 1.53
ALDH1A1P00352 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC24.61■■□□□ 1.53
ALDH1A1P00352 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
ALDH1A1P00352 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
ALDH1A1P00352 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC24.6■■□□□ 1.53
ALDH1A1P00352 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
ALDH1A1P00352 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
ALDH1A1P00352 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
ALDH1A1P00352 AC211429.1-201ENST00000415277 523 ntBASIC24.6■■□□□ 1.53
ALDH1A1P00352 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
ALDH1A1P00352 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
ALDH1A1P00352 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
ALDH1A1P00352 RPPH1-201ENST00000516869 333 ntBASIC24.6■■□□□ 1.53
ALDH1A1P00352 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC24.6■■□□□ 1.53
ALDH1A1P00352 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
ALDH1A1P00352 LINC01023-201ENST00000606054 436 ntBASIC24.6■■□□□ 1.53
ALDH1A1P00352 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
ALDH1A1P00352 AC138932.3-201ENST00000567634 1902 ntBASIC24.6■■□□□ 1.53
ALDH1A1P00352 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC24.6■■□□□ 1.53
ALDH1A1P00352 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
ALDH1A1P00352 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms