Protein–RNA interactions for Protein: O96008

TOMM40, Mitochondrial import receptor subunit TOM40 homolog, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40O96008 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TOMM40O96008 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC16.66■□□□□ 0.26
TOMM40O96008 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TOMM40O96008 SRR-208ENST00000576848 588 ntTSL 4 BASIC16.66■□□□□ 0.26
TOMM40O96008 AC104564.3-201ENST00000582367 638 ntBASIC16.66■□□□□ 0.26
TOMM40O96008 AL138724.1-201ENST00000606771 1088 ntBASIC16.66■□□□□ 0.26
TOMM40O96008 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TOMM40O96008 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TOMM40O96008 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TOMM40O96008 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC16.66■□□□□ 0.26
TOMM40O96008 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TOMM40O96008 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC16.66■□□□□ 0.26
TOMM40O96008 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TOMM40O96008 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TOMM40O96008 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TOMM40O96008 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TOMM40O96008 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TOMM40O96008 ME2-206ENST00000638410 2289 ntTSL 5 BASIC16.65■□□□□ 0.26
TOMM40O96008 ME2-210ENST00000639255 2262 ntTSL 5 BASIC16.65■□□□□ 0.26
TOMM40O96008 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TOMM40O96008 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC16.65■□□□□ 0.26
TOMM40O96008 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TOMM40O96008 PTCHD3P2-201ENST00000424937 1205 ntBASIC16.65■□□□□ 0.26
TOMM40O96008 DUX4L19-201ENST00000557448 1267 ntBASIC16.65■□□□□ 0.26
TOMM40O96008 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TOMM40O96008 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TOMM40O96008 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TOMM40O96008 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TOMM40O96008 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
TOMM40O96008 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TOMM40O96008 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
TOMM40O96008 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC16.64■□□□□ 0.25
TOMM40O96008 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TOMM40O96008 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TOMM40O96008 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TOMM40O96008 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TOMM40O96008 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC16.64■□□□□ 0.25
TOMM40O96008 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TOMM40O96008 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TOMM40O96008 HES6-206ENST00000409574 738 ntTSL 2 BASIC16.64■□□□□ 0.25
TOMM40O96008 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC16.64■□□□□ 0.25
TOMM40O96008 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TOMM40O96008 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC16.64■□□□□ 0.25
TOMM40O96008 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TOMM40O96008 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TOMM40O96008 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TOMM40O96008 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TOMM40O96008 OXCT2P1-201ENST00000447263 1535 ntBASIC16.64■□□□□ 0.25
TOMM40O96008 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
TOMM40O96008 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
TOMM40O96008 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC16.64■□□□□ 0.25
TOMM40O96008 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TOMM40O96008 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC16.64■□□□□ 0.25
TOMM40O96008 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TOMM40O96008 SYT6-210ENST00000641643 1587 ntBASIC16.64■□□□□ 0.25
TOMM40O96008 Z98882.1-201ENST00000622160 2253 ntBASIC16.63■□□□□ 0.25
TOMM40O96008 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
TOMM40O96008 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
TOMM40O96008 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
TOMM40O96008 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TOMM40O96008 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TOMM40O96008 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
TOMM40O96008 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TOMM40O96008 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TOMM40O96008 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TOMM40O96008 RPP21-222ENST00000433076 577 ntTSL 2 BASIC16.63■□□□□ 0.25
TOMM40O96008 AL356441.2-201ENST00000443009 864 ntBASIC16.63■□□□□ 0.25
TOMM40O96008 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC16.63■□□□□ 0.25
TOMM40O96008 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC16.63■□□□□ 0.25
TOMM40O96008 AC010525.1-201ENST00000585559 441 ntBASIC16.63■□□□□ 0.25
TOMM40O96008 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TOMM40O96008 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TOMM40O96008 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TOMM40O96008 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TOMM40O96008 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC16.62■□□□□ 0.25
TOMM40O96008 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TOMM40O96008 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TOMM40O96008 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC16.62■□□□□ 0.25
TOMM40O96008 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TOMM40O96008 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC16.62■□□□□ 0.25
TOMM40O96008 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TOMM40O96008 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC16.62■□□□□ 0.25
TOMM40O96008 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC16.62■□□□□ 0.25
TOMM40O96008 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC16.62■□□□□ 0.25
TOMM40O96008 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC16.62■□□□□ 0.25
TOMM40O96008 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC16.62■□□□□ 0.25
TOMM40O96008 AL034346.1-201ENST00000568244 1277 ntBASIC16.62■□□□□ 0.25
TOMM40O96008 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC16.62■□□□□ 0.25
TOMM40O96008 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TOMM40O96008 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TOMM40O96008 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TOMM40O96008 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TOMM40O96008 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
TOMM40O96008 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TOMM40O96008 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
TOMM40O96008 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC16.61■□□□□ 0.25
TOMM40O96008 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
TOMM40O96008 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
TOMM40O96008 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TOMM40O96008 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms