Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC24.03■■□□□ 1.44
GGPS1O95749 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
GGPS1O95749 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
GGPS1O95749 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
GGPS1O95749 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC24.03■■□□□ 1.44
GGPS1O95749 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
GGPS1O95749 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
GGPS1O95749 BRI3-207ENST00000539286 699 ntTSL 2 BASIC24.03■■□□□ 1.44
GGPS1O95749 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
GGPS1O95749 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC24.03■■□□□ 1.44
GGPS1O95749 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC24.03■■□□□ 1.44
GGPS1O95749 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC24.03■■□□□ 1.44
GGPS1O95749 MAZ-216ENST00000616501 991 ntTSL 5 BASIC24.03■■□□□ 1.44
GGPS1O95749 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
GGPS1O95749 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
GGPS1O95749 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC24.03■■□□□ 1.44
GGPS1O95749 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
GGPS1O95749 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
GGPS1O95749 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
GGPS1O95749 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
GGPS1O95749 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
GGPS1O95749 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC24.02■■□□□ 1.44
GGPS1O95749 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
GGPS1O95749 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC24.02■■□□□ 1.44
GGPS1O95749 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
GGPS1O95749 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
GGPS1O95749 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
GGPS1O95749 NCF1B-203ENST00000435988 1254 ntBASIC24.02■■□□□ 1.44
GGPS1O95749 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC24.02■■□□□ 1.44
GGPS1O95749 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
GGPS1O95749 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
GGPS1O95749 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
GGPS1O95749 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
GGPS1O95749 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
GGPS1O95749 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC24.01■■□□□ 1.43
GGPS1O95749 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC24.01■■□□□ 1.43
GGPS1O95749 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
GGPS1O95749 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
GGPS1O95749 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC24.01■■□□□ 1.43
GGPS1O95749 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
GGPS1O95749 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC24.01■■□□□ 1.43
GGPS1O95749 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
GGPS1O95749 EEF1DP3-203ENST00000566025 782 ntBASIC24.01■■□□□ 1.43
GGPS1O95749 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
GGPS1O95749 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
GGPS1O95749 WT1-AS_3.1-201ENST00000613262 234 ntBASIC24.01■■□□□ 1.43
GGPS1O95749 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
GGPS1O95749 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC24.01■■□□□ 1.43
GGPS1O95749 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
GGPS1O95749 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
GGPS1O95749 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC24■■□□□ 1.43
GGPS1O95749 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
GGPS1O95749 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
GGPS1O95749 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
GGPS1O95749 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
GGPS1O95749 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC24■■□□□ 1.43
GGPS1O95749 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
GGPS1O95749 AL109923.1-201ENST00000618799 583 ntBASIC24■■□□□ 1.43
GGPS1O95749 AC231657.2-201ENST00000624556 255 ntBASIC24■■□□□ 1.43
GGPS1O95749 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC24■■□□□ 1.43
GGPS1O95749 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
GGPS1O95749 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC24■■□□□ 1.43
GGPS1O95749 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC24■■□□□ 1.43
GGPS1O95749 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC24■■□□□ 1.43
GGPS1O95749 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC23.99■■□□□ 1.43
GGPS1O95749 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC23.99■■□□□ 1.43
GGPS1O95749 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
GGPS1O95749 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC23.99■■□□□ 1.43
GGPS1O95749 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC23.99■■□□□ 1.43
GGPS1O95749 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC23.99■■□□□ 1.43
GGPS1O95749 AL050303.2-201ENST00000619798 666 ntBASIC23.99■■□□□ 1.43
GGPS1O95749 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
GGPS1O95749 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
GGPS1O95749 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC23.99■■□□□ 1.43
GGPS1O95749 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC23.99■■□□□ 1.43
GGPS1O95749 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
GGPS1O95749 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
GGPS1O95749 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
GGPS1O95749 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
GGPS1O95749 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC23.98■■□□□ 1.43
GGPS1O95749 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
GGPS1O95749 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC23.98■■□□□ 1.43
GGPS1O95749 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
GGPS1O95749 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
GGPS1O95749 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
GGPS1O95749 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC23.98■■□□□ 1.43
GGPS1O95749 AC007322.1-201ENST00000426983 750 ntBASIC23.98■■□□□ 1.43
GGPS1O95749 KRT18P20-201ENST00000548986 1279 ntBASIC23.98■■□□□ 1.43
GGPS1O95749 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC23.98■■□□□ 1.43
GGPS1O95749 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC23.98■■□□□ 1.43
GGPS1O95749 AC053503.5-201ENST00000601508 636 ntBASIC23.98■■□□□ 1.43
GGPS1O95749 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
GGPS1O95749 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC23.98■■□□□ 1.43
GGPS1O95749 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
GGPS1O95749 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC23.98■■□□□ 1.43
GGPS1O95749 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC23.98■■□□□ 1.43
GGPS1O95749 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
GGPS1O95749 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
GGPS1O95749 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
GGPS1O95749 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms