Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC28.64■■■□□ 2.18
LTN1O94822 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC28.63■■■□□ 2.17
LTN1O94822 AC093787.1-201ENST00000450396 207 ntBASIC28.63■■■□□ 2.17
LTN1O94822 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC28.63■■■□□ 2.17
LTN1O94822 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC28.63■■■□□ 2.17
LTN1O94822 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC28.63■■■□□ 2.17
LTN1O94822 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
LTN1O94822 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC28.63■■■□□ 2.17
LTN1O94822 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
LTN1O94822 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC28.63■■■□□ 2.17
LTN1O94822 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
LTN1O94822 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC28.63■■■□□ 2.17
LTN1O94822 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC28.62■■■□□ 2.17
LTN1O94822 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
LTN1O94822 AC133041.1-202ENST00000642053 222 ntBASIC28.62■■■□□ 2.17
LTN1O94822 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC28.62■■■□□ 2.17
LTN1O94822 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC28.62■■■□□ 2.17
LTN1O94822 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC28.62■■■□□ 2.17
LTN1O94822 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC28.62■■■□□ 2.17
LTN1O94822 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC28.62■■■□□ 2.17
LTN1O94822 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC28.62■■■□□ 2.17
LTN1O94822 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
LTN1O94822 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC28.62■■■□□ 2.17
LTN1O94822 AC137767.1-201ENST00000602918 1920 ntBASIC28.62■■■□□ 2.17
LTN1O94822 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC28.62■■■□□ 2.17
LTN1O94822 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
LTN1O94822 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
LTN1O94822 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC28.61■■■□□ 2.17
LTN1O94822 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
LTN1O94822 PPP1R14BP2-201ENST00000426284 444 ntBASIC28.61■■■□□ 2.17
LTN1O94822 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
LTN1O94822 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC28.61■■■□□ 2.17
LTN1O94822 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
LTN1O94822 GCA-201ENST00000233612 1694 ntTSL 2 BASIC28.61■■■□□ 2.17
LTN1O94822 OR10C1-204ENST00000622521 1039 ntBASIC28.6■■■□□ 2.17
LTN1O94822 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC28.6■■■□□ 2.17
LTN1O94822 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC28.6■■■□□ 2.17
LTN1O94822 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
LTN1O94822 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC28.59■■■□□ 2.17
LTN1O94822 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC28.59■■■□□ 2.17
LTN1O94822 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC28.59■■■□□ 2.17
LTN1O94822 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC28.59■■■□□ 2.17
LTN1O94822 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
LTN1O94822 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
LTN1O94822 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC28.58■■■□□ 2.17
LTN1O94822 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC28.58■■■□□ 2.17
LTN1O94822 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC28.58■■■□□ 2.17
LTN1O94822 AC139530.1-201ENST00000575312 1977 ntBASIC28.58■■■□□ 2.17
LTN1O94822 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
LTN1O94822 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
LTN1O94822 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
LTN1O94822 KRT16P2-201ENST00000414673 1423 ntBASIC28.57■■■□□ 2.16
LTN1O94822 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC28.57■■■□□ 2.16
LTN1O94822 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC28.57■■■□□ 2.16
LTN1O94822 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC28.57■■■□□ 2.16
LTN1O94822 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC28.57■■■□□ 2.16
LTN1O94822 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC28.57■■■□□ 2.16
LTN1O94822 POU5F1P3-201ENST00000428824 1078 ntBASIC28.57■■■□□ 2.16
LTN1O94822 AC093827.2-201ENST00000512654 315 ntBASIC28.57■■■□□ 2.16
LTN1O94822 RARRES2P4-201ENST00000514074 484 ntBASIC28.57■■■□□ 2.16
LTN1O94822 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC28.57■■■□□ 2.16
LTN1O94822 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC28.57■■■□□ 2.16
LTN1O94822 RBM17P2-201ENST00000616397 1405 ntBASIC28.56■■■□□ 2.16
LTN1O94822 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC28.56■■■□□ 2.16
LTN1O94822 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
LTN1O94822 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC28.56■■■□□ 2.16
LTN1O94822 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC28.56■■■□□ 2.16
LTN1O94822 ITM2C-210ENST00000620962 501 ntBASIC28.56■■■□□ 2.16
LTN1O94822 MYC-209ENST00000641252 345 ntBASIC28.56■■■□□ 2.16
LTN1O94822 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
LTN1O94822 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
LTN1O94822 MIPEPP3-201ENST00000412105 444 ntBASIC28.55■■■□□ 2.16
LTN1O94822 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
LTN1O94822 AC098590.1-201ENST00000468126 897 ntBASIC28.55■■■□□ 2.16
LTN1O94822 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC28.55■■■□□ 2.16
LTN1O94822 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
LTN1O94822 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC28.55■■■□□ 2.16
LTN1O94822 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
LTN1O94822 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC28.55■■■□□ 2.16
LTN1O94822 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC28.55■■■□□ 2.16
LTN1O94822 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC28.55■■■□□ 2.16
LTN1O94822 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
LTN1O94822 AC069236.1-201ENST00000604339 616 ntBASIC28.55■■■□□ 2.16
LTN1O94822 AC092118.2-201ENST00000613495 667 ntBASIC28.55■■■□□ 2.16
LTN1O94822 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
LTN1O94822 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
LTN1O94822 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
LTN1O94822 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
LTN1O94822 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC28.54■■■□□ 2.16
LTN1O94822 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC28.54■■■□□ 2.16
LTN1O94822 BX276092.2-201ENST00000417668 665 ntBASIC28.54■■■□□ 2.16
LTN1O94822 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC28.54■■■□□ 2.16
LTN1O94822 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
LTN1O94822 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC28.54■■■□□ 2.16
LTN1O94822 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC28.54■■■□□ 2.16
LTN1O94822 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
LTN1O94822 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
LTN1O94822 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC28.53■■■□□ 2.16
LTN1O94822 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
LTN1O94822 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms