Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC22.51■■□□□ 1.19
BEST1O76090 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC22.51■■□□□ 1.19
BEST1O76090 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
BEST1O76090 TESC-206ENST00000541210 936 ntTSL 3 BASIC22.51■■□□□ 1.19
BEST1O76090 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
BEST1O76090 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
BEST1O76090 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC22.51■■□□□ 1.19
BEST1O76090 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
BEST1O76090 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
BEST1O76090 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
BEST1O76090 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
BEST1O76090 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
BEST1O76090 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
BEST1O76090 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
BEST1O76090 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC22.5■■□□□ 1.19
BEST1O76090 AC104187.1-201ENST00000607510 612 ntBASIC22.5■■□□□ 1.19
BEST1O76090 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
BEST1O76090 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
BEST1O76090 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC22.5■■□□□ 1.19
BEST1O76090 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
BEST1O76090 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
BEST1O76090 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
BEST1O76090 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
BEST1O76090 AC010542.4-201ENST00000563151 1910 ntBASIC22.49■■□□□ 1.19
BEST1O76090 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
BEST1O76090 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
BEST1O76090 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
BEST1O76090 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
BEST1O76090 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
BEST1O76090 ME3-201ENST00000323418 1068 ntTSL 5 BASIC22.49■■□□□ 1.19
BEST1O76090 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC22.49■■□□□ 1.19
BEST1O76090 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
BEST1O76090 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC22.49■■□□□ 1.19
BEST1O76090 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC22.49■■□□□ 1.19
BEST1O76090 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC22.49■■□□□ 1.19
BEST1O76090 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
BEST1O76090 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC22.49■■□□□ 1.19
BEST1O76090 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC22.49■■□□□ 1.19
BEST1O76090 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
BEST1O76090 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
BEST1O76090 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
BEST1O76090 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC22.48■■□□□ 1.19
BEST1O76090 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC22.48■■□□□ 1.19
BEST1O76090 FXN-202ENST00000396364 980 ntTSL 5 BASIC22.48■■□□□ 1.19
BEST1O76090 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC22.48■■□□□ 1.19
BEST1O76090 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC22.48■■□□□ 1.19
BEST1O76090 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC22.48■■□□□ 1.19
BEST1O76090 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC22.48■■□□□ 1.19
BEST1O76090 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
BEST1O76090 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
BEST1O76090 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC22.48■■□□□ 1.19
BEST1O76090 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
BEST1O76090 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
BEST1O76090 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
BEST1O76090 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
BEST1O76090 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
BEST1O76090 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
BEST1O76090 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
BEST1O76090 STX7-201ENST00000367937 1090 ntTSL 5 BASIC22.47■■□□□ 1.19
BEST1O76090 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC22.47■■□□□ 1.19
BEST1O76090 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC22.47■■□□□ 1.19
BEST1O76090 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
BEST1O76090 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC22.47■■□□□ 1.19
BEST1O76090 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC22.47■■□□□ 1.19
BEST1O76090 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
BEST1O76090 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
BEST1O76090 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC22.47■■□□□ 1.19
BEST1O76090 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
BEST1O76090 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
BEST1O76090 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
BEST1O76090 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
BEST1O76090 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
BEST1O76090 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
BEST1O76090 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
BEST1O76090 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
BEST1O76090 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC22.46■■□□□ 1.19
BEST1O76090 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC22.46■■□□□ 1.19
BEST1O76090 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC22.46■■□□□ 1.19
BEST1O76090 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
BEST1O76090 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
BEST1O76090 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
BEST1O76090 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.19
BEST1O76090 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC22.45■■□□□ 1.19
BEST1O76090 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
BEST1O76090 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC22.45■■□□□ 1.18
BEST1O76090 ME2-206ENST00000638410 2289 ntTSL 5 BASIC22.45■■□□□ 1.18
BEST1O76090 ME2-210ENST00000639255 2262 ntTSL 5 BASIC22.45■■□□□ 1.18
BEST1O76090 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
BEST1O76090 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
BEST1O76090 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC22.45■■□□□ 1.18
BEST1O76090 KRT19P1-201ENST00000405746 1186 ntBASIC22.45■■□□□ 1.18
BEST1O76090 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC22.45■■□□□ 1.18
BEST1O76090 SERP1-208ENST00000491660 830 ntTSL 2 BASIC22.45■■□□□ 1.18
BEST1O76090 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC22.45■■□□□ 1.18
BEST1O76090 DBI-210ENST00000542275 757 ntTSL 5 BASIC22.45■■□□□ 1.18
BEST1O76090 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC22.45■■□□□ 1.18
BEST1O76090 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
BEST1O76090 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
BEST1O76090 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
BEST1O76090 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC22.45■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms