Protein–RNA interactions for Protein: O75631

UPK3A, Uroplakin-3a, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3AO75631 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UPK3AO75631 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UPK3AO75631 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.11■□□□□ 0.65
UPK3AO75631 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
UPK3AO75631 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.11■□□□□ 0.65
UPK3AO75631 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.11■□□□□ 0.65
UPK3AO75631 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
UPK3AO75631 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
UPK3AO75631 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
UPK3AO75631 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UPK3AO75631 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
UPK3AO75631 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
UPK3AO75631 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UPK3AO75631 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.1■□□□□ 0.65
UPK3AO75631 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.1■□□□□ 0.65
UPK3AO75631 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
UPK3AO75631 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
UPK3AO75631 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
UPK3AO75631 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
UPK3AO75631 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
UPK3AO75631 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.09■□□□□ 0.65
UPK3AO75631 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.09■□□□□ 0.65
UPK3AO75631 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.09■□□□□ 0.65
UPK3AO75631 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
UPK3AO75631 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
UPK3AO75631 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
UPK3AO75631 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
UPK3AO75631 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
UPK3AO75631 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
UPK3AO75631 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
UPK3AO75631 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
UPK3AO75631 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.09■□□□□ 0.65
UPK3AO75631 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
UPK3AO75631 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
UPK3AO75631 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
UPK3AO75631 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
UPK3AO75631 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
UPK3AO75631 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.08■□□□□ 0.65
UPK3AO75631 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
UPK3AO75631 AC019069.1-201ENST00000610008 1333 ntBASIC19.08■□□□□ 0.65
UPK3AO75631 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.65
UPK3AO75631 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.08■□□□□ 0.64
UPK3AO75631 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.08■□□□□ 0.64
UPK3AO75631 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.08■□□□□ 0.64
UPK3AO75631 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
UPK3AO75631 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
UPK3AO75631 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
UPK3AO75631 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
UPK3AO75631 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.08■□□□□ 0.64
UPK3AO75631 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
UPK3AO75631 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
UPK3AO75631 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.08■□□□□ 0.64
UPK3AO75631 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
UPK3AO75631 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
UPK3AO75631 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.07■□□□□ 0.64
UPK3AO75631 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.07■□□□□ 0.64
UPK3AO75631 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UPK3AO75631 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UPK3AO75631 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.07■□□□□ 0.64
UPK3AO75631 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.07■□□□□ 0.64
UPK3AO75631 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.07■□□□□ 0.64
UPK3AO75631 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.07■□□□□ 0.64
UPK3AO75631 AC005229.4-201ENST00000610085 2198 ntBASIC19.07■□□□□ 0.64
UPK3AO75631 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UPK3AO75631 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
UPK3AO75631 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.07■□□□□ 0.64
UPK3AO75631 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.07■□□□□ 0.64
UPK3AO75631 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
UPK3AO75631 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
UPK3AO75631 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
UPK3AO75631 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UPK3AO75631 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UPK3AO75631 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UPK3AO75631 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UPK3AO75631 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
UPK3AO75631 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UPK3AO75631 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.06■□□□□ 0.64
UPK3AO75631 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.06■□□□□ 0.64
UPK3AO75631 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.06■□□□□ 0.64
UPK3AO75631 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
UPK3AO75631 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
UPK3AO75631 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.06■□□□□ 0.64
UPK3AO75631 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.06■□□□□ 0.64
UPK3AO75631 AC012414.1-201ENST00000556676 535 ntBASIC19.06■□□□□ 0.64
UPK3AO75631 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UPK3AO75631 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
UPK3AO75631 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.06■□□□□ 0.64
UPK3AO75631 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
UPK3AO75631 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UPK3AO75631 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UPK3AO75631 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
UPK3AO75631 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UPK3AO75631 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UPK3AO75631 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.05■□□□□ 0.64
UPK3AO75631 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UPK3AO75631 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.05■□□□□ 0.64
UPK3AO75631 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UPK3AO75631 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UPK3AO75631 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.05■□□□□ 0.64
UPK3AO75631 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms