Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
GFRA3O60609 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
GFRA3O60609 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC21.07■□□□□ 0.96
GFRA3O60609 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.07■□□□□ 0.96
GFRA3O60609 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
GFRA3O60609 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.07■□□□□ 0.96
GFRA3O60609 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
GFRA3O60609 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
GFRA3O60609 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
GFRA3O60609 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.06■□□□□ 0.96
GFRA3O60609 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.06■□□□□ 0.96
GFRA3O60609 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.06■□□□□ 0.96
GFRA3O60609 NME6-213ENST00000451657 871 ntTSL 2 BASIC21.06■□□□□ 0.96
GFRA3O60609 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.06■□□□□ 0.96
GFRA3O60609 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC21.06■□□□□ 0.96
GFRA3O60609 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
GFRA3O60609 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.06■□□□□ 0.96
GFRA3O60609 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
GFRA3O60609 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.05■□□□□ 0.96
GFRA3O60609 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC21.05■□□□□ 0.96
GFRA3O60609 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
GFRA3O60609 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
GFRA3O60609 CRAT-202ENST00000393384 973 ntTSL 2 BASIC21.05■□□□□ 0.96
GFRA3O60609 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
GFRA3O60609 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC21.05■□□□□ 0.96
GFRA3O60609 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC21.05■□□□□ 0.96
GFRA3O60609 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
GFRA3O60609 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC21.05■□□□□ 0.96
GFRA3O60609 AL162412.1-201ENST00000567129 965 ntBASIC21.05■□□□□ 0.96
GFRA3O60609 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
GFRA3O60609 AC092865.7-201ENST00000641832 219 ntBASIC21.05■□□□□ 0.96
GFRA3O60609 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.05■□□□□ 0.96
GFRA3O60609 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC21.05■□□□□ 0.96
GFRA3O60609 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
GFRA3O60609 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
GFRA3O60609 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
GFRA3O60609 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
GFRA3O60609 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GFRA3O60609 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC21.04■□□□□ 0.96
GFRA3O60609 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.04■□□□□ 0.96
GFRA3O60609 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.04■□□□□ 0.96
GFRA3O60609 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
GFRA3O60609 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
GFRA3O60609 AC142086.6-201ENST00000621154 1765 ntBASIC21.03■□□□□ 0.96
GFRA3O60609 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
GFRA3O60609 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
GFRA3O60609 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.03■□□□□ 0.96
GFRA3O60609 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
GFRA3O60609 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.03■□□□□ 0.96
GFRA3O60609 PNMA6B-201ENST00000538162 1200 ntBASIC21.03■□□□□ 0.96
GFRA3O60609 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.03■□□□□ 0.96
GFRA3O60609 AL591742.1-201ENST00000604433 565 ntBASIC21.03■□□□□ 0.96
GFRA3O60609 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
GFRA3O60609 SNX21-213ENST00000614929 587 ntTSL 5 BASIC21.03■□□□□ 0.96
GFRA3O60609 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC21.03■□□□□ 0.96
GFRA3O60609 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.03■□□□□ 0.96
GFRA3O60609 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
GFRA3O60609 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.03■□□□□ 0.96
GFRA3O60609 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
GFRA3O60609 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
GFRA3O60609 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
GFRA3O60609 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
GFRA3O60609 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC21.02■□□□□ 0.96
GFRA3O60609 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC21.02■□□□□ 0.96
GFRA3O60609 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
GFRA3O60609 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
GFRA3O60609 AL355075.4-201ENST00000554988 638 ntBASIC21.02■□□□□ 0.96
GFRA3O60609 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC21.02■□□□□ 0.96
GFRA3O60609 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.95
GFRA3O60609 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.01■□□□□ 0.95
GFRA3O60609 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.01■□□□□ 0.95
GFRA3O60609 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.01■□□□□ 0.95
GFRA3O60609 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
GFRA3O60609 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
GFRA3O60609 ISG20-202ENST00000379224 540 ntTSL 3 BASIC21.01■□□□□ 0.95
GFRA3O60609 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC21.01■□□□□ 0.95
GFRA3O60609 NME3-204ENST00000563498 920 ntTSL 2 BASIC21.01■□□□□ 0.95
GFRA3O60609 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
GFRA3O60609 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC21.01■□□□□ 0.95
GFRA3O60609 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
GFRA3O60609 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
GFRA3O60609 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC21■□□□□ 0.95
GFRA3O60609 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC21■□□□□ 0.95
GFRA3O60609 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
GFRA3O60609 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC21■□□□□ 0.95
GFRA3O60609 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC21■□□□□ 0.95
GFRA3O60609 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21■□□□□ 0.95
GFRA3O60609 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC21■□□□□ 0.95
GFRA3O60609 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21■□□□□ 0.95
GFRA3O60609 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21■□□□□ 0.95
GFRA3O60609 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
GFRA3O60609 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
GFRA3O60609 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
GFRA3O60609 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
GFRA3O60609 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
GFRA3O60609 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.99■□□□□ 0.95
GFRA3O60609 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
GFRA3O60609 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.99■□□□□ 0.95
GFRA3O60609 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
GFRA3O60609 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms