Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SSSCA1O60232 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.36■□□□□ 0.37
SSSCA1O60232 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SSSCA1O60232 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SSSCA1O60232 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SSSCA1O60232 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SSSCA1O60232 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SSSCA1O60232 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SSSCA1O60232 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SSSCA1O60232 AC104564.3-201ENST00000582367 638 ntBASIC17.36■□□□□ 0.37
SSSCA1O60232 AC010980.1-201ENST00000587192 1142 ntBASIC17.36■□□□□ 0.37
SSSCA1O60232 AC026471.6-201ENST00000622954 1905 ntBASIC17.36■□□□□ 0.37
SSSCA1O60232 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SSSCA1O60232 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SSSCA1O60232 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SSSCA1O60232 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SSSCA1O60232 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SSSCA1O60232 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC17.36■□□□□ 0.37
SSSCA1O60232 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SSSCA1O60232 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SSSCA1O60232 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SSSCA1O60232 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SSSCA1O60232 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SSSCA1O60232 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
SSSCA1O60232 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.35■□□□□ 0.37
SSSCA1O60232 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC17.35■□□□□ 0.37
SSSCA1O60232 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SSSCA1O60232 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SSSCA1O60232 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SSSCA1O60232 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC17.35■□□□□ 0.37
SSSCA1O60232 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SSSCA1O60232 NKILA-201ENST00000613231 537 ntTSL 4 BASIC17.35■□□□□ 0.37
SSSCA1O60232 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC17.35■□□□□ 0.37
SSSCA1O60232 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SSSCA1O60232 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SSSCA1O60232 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
SSSCA1O60232 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SSSCA1O60232 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC17.35■□□□□ 0.37
SSSCA1O60232 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SSSCA1O60232 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SSSCA1O60232 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SSSCA1O60232 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.35■□□□□ 0.37
SSSCA1O60232 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SSSCA1O60232 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SSSCA1O60232 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC17.34■□□□□ 0.37
SSSCA1O60232 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.34■□□□□ 0.37
SSSCA1O60232 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SSSCA1O60232 SENP5-202ENST00000419026 973 ntTSL 3 BASIC17.34■□□□□ 0.37
SSSCA1O60232 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC17.34■□□□□ 0.37
SSSCA1O60232 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC17.34■□□□□ 0.37
SSSCA1O60232 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
SSSCA1O60232 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SSSCA1O60232 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
SSSCA1O60232 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SSSCA1O60232 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
SSSCA1O60232 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SSSCA1O60232 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SSSCA1O60232 MFF-203ENST00000349901 1716 ntTSL 2 BASIC17.33■□□□□ 0.37
SSSCA1O60232 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC17.33■□□□□ 0.37
SSSCA1O60232 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SSSCA1O60232 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SSSCA1O60232 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
SSSCA1O60232 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.33■□□□□ 0.36
SSSCA1O60232 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
SSSCA1O60232 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SSSCA1O60232 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC17.33■□□□□ 0.36
SSSCA1O60232 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.36
SSSCA1O60232 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SSSCA1O60232 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC17.33■□□□□ 0.36
SSSCA1O60232 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
SSSCA1O60232 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SSSCA1O60232 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SSSCA1O60232 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SSSCA1O60232 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SSSCA1O60232 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
SSSCA1O60232 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SSSCA1O60232 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SSSCA1O60232 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
SSSCA1O60232 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SSSCA1O60232 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SSSCA1O60232 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SSSCA1O60232 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SSSCA1O60232 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SSSCA1O60232 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
SSSCA1O60232 OXCT2P1-201ENST00000447263 1535 ntBASIC17.31■□□□□ 0.36
SSSCA1O60232 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC17.31■□□□□ 0.36
SSSCA1O60232 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC17.31■□□□□ 0.36
SSSCA1O60232 FEM1AP1-201ENST00000431297 1995 ntBASIC17.31■□□□□ 0.36
SSSCA1O60232 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSSCA1O60232 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
SSSCA1O60232 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSSCA1O60232 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC17.31■□□□□ 0.36
SSSCA1O60232 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSSCA1O60232 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.31■□□□□ 0.36
SSSCA1O60232 MIR6722-201ENST00000617286 78 ntBASIC17.31■□□□□ 0.36
SSSCA1O60232 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
SSSCA1O60232 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SSSCA1O60232 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSSCA1O60232 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
SSSCA1O60232 DYM-203ENST00000442713 2147 ntTSL 2 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms