Protein–RNA interactions for Protein: O43915

VEGFD, Vascular endothelial growth factor D, humanhuman

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFDO43915 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VEGFDO43915 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21■□□□□ 0.95
VEGFDO43915 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VEGFDO43915 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
VEGFDO43915 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21■□□□□ 0.95
VEGFDO43915 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
VEGFDO43915 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VEGFDO43915 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VEGFDO43915 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21■□□□□ 0.95
VEGFDO43915 GXYLT1P2-201ENST00000433312 1230 ntBASIC21■□□□□ 0.95
VEGFDO43915 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21■□□□□ 0.95
VEGFDO43915 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21■□□□□ 0.95
VEGFDO43915 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21■□□□□ 0.95
VEGFDO43915 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VEGFDO43915 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.99■□□□□ 0.95
VEGFDO43915 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
VEGFDO43915 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.99■□□□□ 0.95
VEGFDO43915 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VEGFDO43915 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
VEGFDO43915 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
VEGFDO43915 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.99■□□□□ 0.95
VEGFDO43915 KRT18P61-201ENST00000585825 1298 ntBASIC20.99■□□□□ 0.95
VEGFDO43915 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
VEGFDO43915 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.99■□□□□ 0.95
VEGFDO43915 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
VEGFDO43915 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
VEGFDO43915 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
VEGFDO43915 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
VEGFDO43915 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
VEGFDO43915 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
VEGFDO43915 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.98■□□□□ 0.95
VEGFDO43915 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
VEGFDO43915 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.98■□□□□ 0.95
VEGFDO43915 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VEGFDO43915 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
VEGFDO43915 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.98■□□□□ 0.95
VEGFDO43915 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.98■□□□□ 0.95
VEGFDO43915 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
VEGFDO43915 AC053503.5-201ENST00000601508 636 ntBASIC20.98■□□□□ 0.95
VEGFDO43915 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
VEGFDO43915 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VEGFDO43915 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VEGFDO43915 AC003102.1-202ENST00000563394 1796 ntBASIC20.97■□□□□ 0.95
VEGFDO43915 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
VEGFDO43915 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VEGFDO43915 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VEGFDO43915 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VEGFDO43915 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VEGFDO43915 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
VEGFDO43915 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.97■□□□□ 0.95
VEGFDO43915 EEF1DP3-203ENST00000566025 782 ntBASIC20.97■□□□□ 0.95
VEGFDO43915 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
VEGFDO43915 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VEGFDO43915 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
VEGFDO43915 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VEGFDO43915 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VEGFDO43915 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
VEGFDO43915 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VEGFDO43915 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
VEGFDO43915 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.96■□□□□ 0.95
VEGFDO43915 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VEGFDO43915 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
VEGFDO43915 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.96■□□□□ 0.95
VEGFDO43915 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.96■□□□□ 0.95
VEGFDO43915 AC022517.1-201ENST00000592429 346 ntBASIC20.96■□□□□ 0.95
VEGFDO43915 AC104187.1-201ENST00000607510 612 ntBASIC20.96■□□□□ 0.95
VEGFDO43915 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
VEGFDO43915 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
VEGFDO43915 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
VEGFDO43915 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
VEGFDO43915 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.95■□□□□ 0.94
VEGFDO43915 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
VEGFDO43915 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
VEGFDO43915 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
VEGFDO43915 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
VEGFDO43915 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
VEGFDO43915 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
VEGFDO43915 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
VEGFDO43915 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
VEGFDO43915 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
VEGFDO43915 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VEGFDO43915 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VEGFDO43915 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VEGFDO43915 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.94■□□□□ 0.94
VEGFDO43915 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VEGFDO43915 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VEGFDO43915 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VEGFDO43915 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
VEGFDO43915 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
VEGFDO43915 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.94■□□□□ 0.94
VEGFDO43915 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.94■□□□□ 0.94
VEGFDO43915 AC138907.5-202ENST00000569484 235 ntBASIC20.94■□□□□ 0.94
VEGFDO43915 AC026471.6-201ENST00000622954 1905 ntBASIC20.94■□□□□ 0.94
VEGFDO43915 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.94■□□□□ 0.94
VEGFDO43915 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VEGFDO43915 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
VEGFDO43915 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
VEGFDO43915 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VEGFDO43915 C11orf96-202ENST00000528572 1834 ntBASIC20.93■□□□□ 0.94
VEGFDO43915 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms