Protein–RNA interactions for Protein: O15522

NKX2-8, Homeobox protein Nkx-2.8, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-8O15522 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.82■□□□□ 0.76
NKX2-8O15522 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NKX2-8O15522 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NKX2-8O15522 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.82■□□□□ 0.76
NKX2-8O15522 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
NKX2-8O15522 BX276092.2-201ENST00000417668 665 ntBASIC19.82■□□□□ 0.76
NKX2-8O15522 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.82■□□□□ 0.76
NKX2-8O15522 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.82■□□□□ 0.76
NKX2-8O15522 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.82■□□□□ 0.76
NKX2-8O15522 AC069236.1-201ENST00000604339 616 ntBASIC19.82■□□□□ 0.76
NKX2-8O15522 AC092118.2-201ENST00000613495 667 ntBASIC19.82■□□□□ 0.76
NKX2-8O15522 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
NKX2-8O15522 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.82■□□□□ 0.76
NKX2-8O15522 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NKX2-8O15522 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NKX2-8O15522 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NKX2-8O15522 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.81■□□□□ 0.76
NKX2-8O15522 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
NKX2-8O15522 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.81■□□□□ 0.76
NKX2-8O15522 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NKX2-8O15522 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
NKX2-8O15522 AL512625.2-201ENST00000417533 625 ntBASIC19.81■□□□□ 0.76
NKX2-8O15522 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.81■□□□□ 0.76
NKX2-8O15522 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
NKX2-8O15522 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.81■□□□□ 0.76
NKX2-8O15522 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NKX2-8O15522 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NKX2-8O15522 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NKX2-8O15522 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NKX2-8O15522 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
NKX2-8O15522 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NKX2-8O15522 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NKX2-8O15522 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NKX2-8O15522 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NKX2-8O15522 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NKX2-8O15522 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.8■□□□□ 0.76
NKX2-8O15522 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NKX2-8O15522 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.8■□□□□ 0.76
NKX2-8O15522 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
NKX2-8O15522 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NKX2-8O15522 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.8■□□□□ 0.76
NKX2-8O15522 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.8■□□□□ 0.76
NKX2-8O15522 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.8■□□□□ 0.76
NKX2-8O15522 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.8■□□□□ 0.76
NKX2-8O15522 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NKX2-8O15522 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
NKX2-8O15522 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NKX2-8O15522 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NKX2-8O15522 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NKX2-8O15522 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NKX2-8O15522 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
NKX2-8O15522 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NKX2-8O15522 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.79■□□□□ 0.76
NKX2-8O15522 AC120498.10-201ENST00000621827 505 ntBASIC19.79■□□□□ 0.76
NKX2-8O15522 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NKX2-8O15522 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
NKX2-8O15522 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.78■□□□□ 0.76
NKX2-8O15522 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NKX2-8O15522 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.78■□□□□ 0.76
NKX2-8O15522 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NKX2-8O15522 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.78■□□□□ 0.76
NKX2-8O15522 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
NKX2-8O15522 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NKX2-8O15522 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
NKX2-8O15522 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
NKX2-8O15522 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
NKX2-8O15522 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NKX2-8O15522 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.78■□□□□ 0.76
NKX2-8O15522 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.78■□□□□ 0.76
NKX2-8O15522 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
NKX2-8O15522 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.78■□□□□ 0.76
NKX2-8O15522 RARRES2P4-201ENST00000514074 484 ntBASIC19.78■□□□□ 0.76
NKX2-8O15522 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.78■□□□□ 0.76
NKX2-8O15522 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.78■□□□□ 0.76
NKX2-8O15522 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.78■□□□□ 0.76
NKX2-8O15522 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NKX2-8O15522 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NKX2-8O15522 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NKX2-8O15522 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NKX2-8O15522 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NKX2-8O15522 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.77■□□□□ 0.76
NKX2-8O15522 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
NKX2-8O15522 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NKX2-8O15522 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NKX2-8O15522 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NKX2-8O15522 RPS2P52-201ENST00000469610 820 ntBASIC19.77■□□□□ 0.76
NKX2-8O15522 AC083880.1-201ENST00000608266 535 ntBASIC19.77■□□□□ 0.76
NKX2-8O15522 AC008175.2-201ENST00000612840 297 ntBASIC19.77■□□□□ 0.76
NKX2-8O15522 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NKX2-8O15522 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NKX2-8O15522 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.76■□□□□ 0.75
NKX2-8O15522 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NKX2-8O15522 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NKX2-8O15522 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.76■□□□□ 0.75
NKX2-8O15522 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.76■□□□□ 0.75
NKX2-8O15522 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.76■□□□□ 0.75
NKX2-8O15522 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NKX2-8O15522 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
NKX2-8O15522 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
NKX2-8O15522 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms