Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
UBFD1O14562 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
UBFD1O14562 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.74■□□□□ 0.91
UBFD1O14562 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
UBFD1O14562 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
UBFD1O14562 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.74■□□□□ 0.91
UBFD1O14562 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
UBFD1O14562 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
UBFD1O14562 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
UBFD1O14562 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
UBFD1O14562 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.73■□□□□ 0.91
UBFD1O14562 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
UBFD1O14562 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
UBFD1O14562 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
UBFD1O14562 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
UBFD1O14562 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.72■□□□□ 0.91
UBFD1O14562 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
UBFD1O14562 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
UBFD1O14562 AC131281.2-201ENST00000520478 145 ntBASIC20.72■□□□□ 0.91
UBFD1O14562 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.72■□□□□ 0.91
UBFD1O14562 AC011298.3-201ENST00000615796 283 ntBASIC20.72■□□□□ 0.91
UBFD1O14562 AP004607.7-201ENST00000527152 1677 ntBASIC20.72■□□□□ 0.91
UBFD1O14562 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.72■□□□□ 0.91
UBFD1O14562 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
UBFD1O14562 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
UBFD1O14562 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
UBFD1O14562 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
UBFD1O14562 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
UBFD1O14562 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.71■□□□□ 0.91
UBFD1O14562 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
UBFD1O14562 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
UBFD1O14562 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
UBFD1O14562 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
UBFD1O14562 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
UBFD1O14562 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
UBFD1O14562 AP005435.1-201ENST00000529293 1178 ntBASIC20.71■□□□□ 0.91
UBFD1O14562 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.71■□□□□ 0.91
UBFD1O14562 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
UBFD1O14562 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
UBFD1O14562 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.71■□□□□ 0.91
UBFD1O14562 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
UBFD1O14562 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.91
UBFD1O14562 AL157384.1-201ENST00000445995 2473 ntBASIC20.7■□□□□ 0.9
UBFD1O14562 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
UBFD1O14562 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
UBFD1O14562 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.7■□□□□ 0.9
UBFD1O14562 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.7■□□□□ 0.9
UBFD1O14562 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.7■□□□□ 0.9
UBFD1O14562 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
UBFD1O14562 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
UBFD1O14562 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.7■□□□□ 0.9
UBFD1O14562 DUX4L19-201ENST00000557448 1267 ntBASIC20.7■□□□□ 0.9
UBFD1O14562 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.7■□□□□ 0.9
UBFD1O14562 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
UBFD1O14562 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
UBFD1O14562 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
UBFD1O14562 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
UBFD1O14562 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.69■□□□□ 0.9
UBFD1O14562 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.69■□□□□ 0.9
UBFD1O14562 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.69■□□□□ 0.9
UBFD1O14562 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
UBFD1O14562 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.69■□□□□ 0.9
UBFD1O14562 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
UBFD1O14562 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.69■□□□□ 0.9
UBFD1O14562 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
UBFD1O14562 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
UBFD1O14562 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
UBFD1O14562 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
UBFD1O14562 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.68■□□□□ 0.9
UBFD1O14562 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
UBFD1O14562 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBFD1O14562 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBFD1O14562 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBFD1O14562 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBFD1O14562 AC073130.3-201ENST00000624389 2278 ntBASIC20.68■□□□□ 0.9
UBFD1O14562 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBFD1O14562 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.68■□□□□ 0.9
UBFD1O14562 AL034346.1-201ENST00000568244 1277 ntBASIC20.68■□□□□ 0.9
UBFD1O14562 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.68■□□□□ 0.9
UBFD1O14562 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.68■□□□□ 0.9
UBFD1O14562 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.68■□□□□ 0.9
UBFD1O14562 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBFD1O14562 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBFD1O14562 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBFD1O14562 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
UBFD1O14562 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBFD1O14562 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBFD1O14562 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
UBFD1O14562 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBFD1O14562 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBFD1O14562 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
UBFD1O14562 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.67■□□□□ 0.9
UBFD1O14562 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBFD1O14562 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBFD1O14562 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBFD1O14562 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
UBFD1O14562 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBFD1O14562 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.66■□□□□ 0.9
UBFD1O14562 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
UBFD1O14562 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms