Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC16.85■□□□□ 0.29
RBFOX3A6NFN3 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RBFOX3A6NFN3 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC16.85■□□□□ 0.29
RBFOX3A6NFN3 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC16.85■□□□□ 0.29
RBFOX3A6NFN3 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RBFOX3A6NFN3 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC16.84■□□□□ 0.29
RBFOX3A6NFN3 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
RBFOX3A6NFN3 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RBFOX3A6NFN3 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RBFOX3A6NFN3 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RBFOX3A6NFN3 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RBFOX3A6NFN3 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC16.84■□□□□ 0.29
RBFOX3A6NFN3 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
RBFOX3A6NFN3 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RBFOX3A6NFN3 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RBFOX3A6NFN3 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RBFOX3A6NFN3 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
RBFOX3A6NFN3 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RBFOX3A6NFN3 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
RBFOX3A6NFN3 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RBFOX3A6NFN3 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
RBFOX3A6NFN3 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RBFOX3A6NFN3 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
RBFOX3A6NFN3 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RBFOX3A6NFN3 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RBFOX3A6NFN3 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
RBFOX3A6NFN3 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC16.84■□□□□ 0.29
RBFOX3A6NFN3 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC16.84■□□□□ 0.29
RBFOX3A6NFN3 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC16.84■□□□□ 0.29
RBFOX3A6NFN3 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RBFOX3A6NFN3 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
RBFOX3A6NFN3 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
RBFOX3A6NFN3 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RBFOX3A6NFN3 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RBFOX3A6NFN3 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RBFOX3A6NFN3 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RBFOX3A6NFN3 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
RBFOX3A6NFN3 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC16.83■□□□□ 0.28
RBFOX3A6NFN3 RPS2P7-201ENST00000447334 885 ntBASIC16.83■□□□□ 0.28
RBFOX3A6NFN3 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RBFOX3A6NFN3 AP005212.1-201ENST00000581547 1997 ntBASIC16.83■□□□□ 0.28
RBFOX3A6NFN3 AC016575.1-201ENST00000607026 382 ntBASIC16.83■□□□□ 0.28
RBFOX3A6NFN3 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RBFOX3A6NFN3 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RBFOX3A6NFN3 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
RBFOX3A6NFN3 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RBFOX3A6NFN3 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
RBFOX3A6NFN3 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RBFOX3A6NFN3 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RBFOX3A6NFN3 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RBFOX3A6NFN3 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RBFOX3A6NFN3 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
RBFOX3A6NFN3 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RBFOX3A6NFN3 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
RBFOX3A6NFN3 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
RBFOX3A6NFN3 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RBFOX3A6NFN3 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RBFOX3A6NFN3 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
RBFOX3A6NFN3 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RBFOX3A6NFN3 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RBFOX3A6NFN3 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC16.82■□□□□ 0.28
RBFOX3A6NFN3 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC16.82■□□□□ 0.28
RBFOX3A6NFN3 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RBFOX3A6NFN3 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RBFOX3A6NFN3 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
RBFOX3A6NFN3 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RBFOX3A6NFN3 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RBFOX3A6NFN3 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC16.81■□□□□ 0.28
RBFOX3A6NFN3 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.81■□□□□ 0.28
RBFOX3A6NFN3 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RBFOX3A6NFN3 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RBFOX3A6NFN3 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RBFOX3A6NFN3 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RBFOX3A6NFN3 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RBFOX3A6NFN3 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC16.81■□□□□ 0.28
RBFOX3A6NFN3 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RBFOX3A6NFN3 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RBFOX3A6NFN3 AC007029.1-201ENST00000604183 313 ntBASIC16.81■□□□□ 0.28
RBFOX3A6NFN3 CA15P2-201ENST00000611168 834 ntBASIC16.81■□□□□ 0.28
RBFOX3A6NFN3 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC16.81■□□□□ 0.28
RBFOX3A6NFN3 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RBFOX3A6NFN3 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RBFOX3A6NFN3 ME2-216ENST00000639850 2331 ntTSL 5 BASIC16.81■□□□□ 0.28
RBFOX3A6NFN3 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RBFOX3A6NFN3 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
RBFOX3A6NFN3 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC16.8■□□□□ 0.28
RBFOX3A6NFN3 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RBFOX3A6NFN3 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC16.8■□□□□ 0.28
RBFOX3A6NFN3 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC16.8■□□□□ 0.28
RBFOX3A6NFN3 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC16.8■□□□□ 0.28
RBFOX3A6NFN3 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RBFOX3A6NFN3 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
RBFOX3A6NFN3 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RBFOX3A6NFN3 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RBFOX3A6NFN3 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RBFOX3A6NFN3 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RBFOX3A6NFN3 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RBFOX3A6NFN3 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RBFOX3A6NFN3 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RBFOX3A6NFN3 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms