Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.72■■□□□ 1.07
TBC1D3BA6NDS4 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TBC1D3BA6NDS4 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TBC1D3BA6NDS4 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
TBC1D3BA6NDS4 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.72■■□□□ 1.07
TBC1D3BA6NDS4 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.72■■□□□ 1.07
TBC1D3BA6NDS4 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.72■■□□□ 1.07
TBC1D3BA6NDS4 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.72■■□□□ 1.07
TBC1D3BA6NDS4 CNN2P6-201ENST00000439038 900 ntBASIC21.72■■□□□ 1.07
TBC1D3BA6NDS4 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.72■■□□□ 1.07
TBC1D3BA6NDS4 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.72■■□□□ 1.07
TBC1D3BA6NDS4 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21.72■■□□□ 1.07
TBC1D3BA6NDS4 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.72■■□□□ 1.07
TBC1D3BA6NDS4 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.72■■□□□ 1.07
TBC1D3BA6NDS4 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TBC1D3BA6NDS4 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TBC1D3BA6NDS4 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TBC1D3BA6NDS4 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TBC1D3BA6NDS4 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TBC1D3BA6NDS4 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TBC1D3BA6NDS4 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.71■■□□□ 1.07
TBC1D3BA6NDS4 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TBC1D3BA6NDS4 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TBC1D3BA6NDS4 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TBC1D3BA6NDS4 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TBC1D3BA6NDS4 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TBC1D3BA6NDS4 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TBC1D3BA6NDS4 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
TBC1D3BA6NDS4 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
TBC1D3BA6NDS4 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TBC1D3BA6NDS4 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
TBC1D3BA6NDS4 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.71■■□□□ 1.07
TBC1D3BA6NDS4 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
TBC1D3BA6NDS4 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TBC1D3BA6NDS4 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TBC1D3BA6NDS4 SLC29A4P1-201ENST00000398760 971 ntBASIC21.71■■□□□ 1.07
TBC1D3BA6NDS4 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.71■■□□□ 1.07
TBC1D3BA6NDS4 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.71■■□□□ 1.07
TBC1D3BA6NDS4 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
TBC1D3BA6NDS4 SLC7A5P2-201ENST00000553010 536 ntBASIC21.71■■□□□ 1.07
TBC1D3BA6NDS4 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
TBC1D3BA6NDS4 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.71■■□□□ 1.07
TBC1D3BA6NDS4 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.71■■□□□ 1.07
TBC1D3BA6NDS4 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
TBC1D3BA6NDS4 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.71■■□□□ 1.07
TBC1D3BA6NDS4 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.71■■□□□ 1.07
TBC1D3BA6NDS4 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.71■■□□□ 1.07
TBC1D3BA6NDS4 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TBC1D3BA6NDS4 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TBC1D3BA6NDS4 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TBC1D3BA6NDS4 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TBC1D3BA6NDS4 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TBC1D3BA6NDS4 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
TBC1D3BA6NDS4 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TBC1D3BA6NDS4 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TBC1D3BA6NDS4 AC142086.2-201ENST00000569753 217 ntBASIC21.7■■□□□ 1.06
TBC1D3BA6NDS4 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.7■■□□□ 1.06
TBC1D3BA6NDS4 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
TBC1D3BA6NDS4 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.06
TBC1D3BA6NDS4 AC139530.1-201ENST00000575312 1977 ntBASIC21.7■■□□□ 1.06
TBC1D3BA6NDS4 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TBC1D3BA6NDS4 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TBC1D3BA6NDS4 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TBC1D3BA6NDS4 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TBC1D3BA6NDS4 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.69■■□□□ 1.06
TBC1D3BA6NDS4 APTR-205ENST00000447009 902 ntTSL 2 BASIC21.69■■□□□ 1.06
TBC1D3BA6NDS4 AF201337.1-201ENST00000520239 748 ntBASIC21.69■■□□□ 1.06
TBC1D3BA6NDS4 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
TBC1D3BA6NDS4 SLC7A5P1-201ENST00000568957 537 ntBASIC21.69■■□□□ 1.06
TBC1D3BA6NDS4 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.69■■□□□ 1.06
TBC1D3BA6NDS4 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.69■■□□□ 1.06
TBC1D3BA6NDS4 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.69■■□□□ 1.06
TBC1D3BA6NDS4 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.69■■□□□ 1.06
TBC1D3BA6NDS4 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
TBC1D3BA6NDS4 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TBC1D3BA6NDS4 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.68■■□□□ 1.06
TBC1D3BA6NDS4 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.68■■□□□ 1.06
TBC1D3BA6NDS4 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
TBC1D3BA6NDS4 TERF1P5-201ENST00000477545 1207 ntBASIC21.68■■□□□ 1.06
TBC1D3BA6NDS4 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.68■■□□□ 1.06
TBC1D3BA6NDS4 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.68■■□□□ 1.06
TBC1D3BA6NDS4 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.68■■□□□ 1.06
TBC1D3BA6NDS4 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.68■■□□□ 1.06
TBC1D3BA6NDS4 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21.68■■□□□ 1.06
TBC1D3BA6NDS4 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TBC1D3BA6NDS4 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TBC1D3BA6NDS4 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TBC1D3BA6NDS4 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TBC1D3BA6NDS4 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TBC1D3BA6NDS4 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.68■■□□□ 1.06
TBC1D3BA6NDS4 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.68■■□□□ 1.06
TBC1D3BA6NDS4 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TBC1D3BA6NDS4 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.67■■□□□ 1.06
TBC1D3BA6NDS4 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TBC1D3BA6NDS4 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
TBC1D3BA6NDS4 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TBC1D3BA6NDS4 AC105036.2-201ENST00000569468 176 ntBASIC21.67■■□□□ 1.06
TBC1D3BA6NDS4 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.67■■□□□ 1.06
TBC1D3BA6NDS4 AC008175.2-201ENST00000612840 297 ntBASIC21.67■■□□□ 1.06
TBC1D3BA6NDS4 AC120498.10-201ENST00000621827 505 ntBASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms