Protein–RNA interactions for Protein: A6NCQ9

RNF222, RING finger protein 222, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF222A6NCQ9 AC009086.3-201ENST00000623486 1008 ntBASIC17.39■□□□□ 0.37
RNF222A6NCQ9 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.39■□□□□ 0.37
RNF222A6NCQ9 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
RNF222A6NCQ9 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.39■□□□□ 0.37
RNF222A6NCQ9 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF222A6NCQ9 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
RNF222A6NCQ9 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.39■□□□□ 0.37
RNF222A6NCQ9 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF222A6NCQ9 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF222A6NCQ9 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF222A6NCQ9 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF222A6NCQ9 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RNF222A6NCQ9 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.38■□□□□ 0.37
RNF222A6NCQ9 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RNF222A6NCQ9 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC17.38■□□□□ 0.37
RNF222A6NCQ9 AC009831.1-201ENST00000580420 1582 ntBASIC17.38■□□□□ 0.37
RNF222A6NCQ9 MLEC-202ENST00000412616 841 ntTSL 3 BASIC17.38■□□□□ 0.37
RNF222A6NCQ9 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF222A6NCQ9 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF222A6NCQ9 GAK-223ENST00000628912 497 ntTSL 5 BASIC17.38■□□□□ 0.37
RNF222A6NCQ9 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF222A6NCQ9 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
RNF222A6NCQ9 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC17.38■□□□□ 0.37
RNF222A6NCQ9 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF222A6NCQ9 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF222A6NCQ9 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.38■□□□□ 0.37
RNF222A6NCQ9 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF222A6NCQ9 BX323043.1-201ENST00000641006 1765 ntBASIC17.38■□□□□ 0.37
RNF222A6NCQ9 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RNF222A6NCQ9 SMG8-203ENST00000578922 2178 ntBASIC17.38■□□□□ 0.37
RNF222A6NCQ9 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
RNF222A6NCQ9 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF222A6NCQ9 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC17.37■□□□□ 0.37
RNF222A6NCQ9 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF222A6NCQ9 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
RNF222A6NCQ9 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
RNF222A6NCQ9 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF222A6NCQ9 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF222A6NCQ9 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.37■□□□□ 0.37
RNF222A6NCQ9 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
RNF222A6NCQ9 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RNF222A6NCQ9 MACF1-219ENST00000484793 834 ntTSL 2 BASIC17.37■□□□□ 0.37
RNF222A6NCQ9 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RNF222A6NCQ9 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF222A6NCQ9 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF222A6NCQ9 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF222A6NCQ9 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF222A6NCQ9 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC17.37■□□□□ 0.37
RNF222A6NCQ9 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
RNF222A6NCQ9 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC17.37■□□□□ 0.37
RNF222A6NCQ9 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF222A6NCQ9 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
RNF222A6NCQ9 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF222A6NCQ9 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
RNF222A6NCQ9 AC018445.3-201ENST00000624177 1945 ntBASIC17.37■□□□□ 0.37
RNF222A6NCQ9 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF222A6NCQ9 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RNF222A6NCQ9 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC17.36■□□□□ 0.37
RNF222A6NCQ9 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
RNF222A6NCQ9 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF222A6NCQ9 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.36■□□□□ 0.37
RNF222A6NCQ9 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF222A6NCQ9 TPT1-202ENST00000379055 948 ntTSL 2 BASIC17.36■□□□□ 0.37
RNF222A6NCQ9 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC17.36■□□□□ 0.37
RNF222A6NCQ9 AC016575.1-201ENST00000607026 382 ntBASIC17.36■□□□□ 0.37
RNF222A6NCQ9 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC17.36■□□□□ 0.37
RNF222A6NCQ9 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
RNF222A6NCQ9 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RNF222A6NCQ9 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RNF222A6NCQ9 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC17.36■□□□□ 0.37
RNF222A6NCQ9 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF222A6NCQ9 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.35■□□□□ 0.37
RNF222A6NCQ9 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF222A6NCQ9 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
RNF222A6NCQ9 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF222A6NCQ9 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF222A6NCQ9 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF222A6NCQ9 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF222A6NCQ9 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF222A6NCQ9 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RNF222A6NCQ9 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF222A6NCQ9 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RNF222A6NCQ9 AC022413.1-201ENST00000624602 984 ntBASIC17.35■□□□□ 0.37
RNF222A6NCQ9 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF222A6NCQ9 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF222A6NCQ9 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF222A6NCQ9 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF222A6NCQ9 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC17.35■□□□□ 0.37
RNF222A6NCQ9 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF222A6NCQ9 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF222A6NCQ9 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF222A6NCQ9 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.35■□□□□ 0.37
RNF222A6NCQ9 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF222A6NCQ9 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.35■□□□□ 0.37
RNF222A6NCQ9 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
RNF222A6NCQ9 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RNF222A6NCQ9 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF222A6NCQ9 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF222A6NCQ9 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RNF222A6NCQ9 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms