Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRBV6-4A0A1B0GX49 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRBV6-4A0A1B0GX49 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRBV6-4A0A1B0GX49 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC15.07■□□□□ 0
TRBV6-4A0A1B0GX49 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
TRBV6-4A0A1B0GX49 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC15.06■□□□□ 0
TRBV6-4A0A1B0GX49 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
TRBV6-4A0A1B0GX49 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRBV6-4A0A1B0GX49 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC15.06■□□□□ 0
TRBV6-4A0A1B0GX49 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC15.06■□□□□ 0
TRBV6-4A0A1B0GX49 SMUG1P1-201ENST00000590640 811 ntBASIC15.06■□□□□ 0
TRBV6-4A0A1B0GX49 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRBV6-4A0A1B0GX49 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC15.06■□□□□ 0
TRBV6-4A0A1B0GX49 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC15.06■□□□□ 0
TRBV6-4A0A1B0GX49 ME2-206ENST00000638410 2289 ntTSL 5 BASIC15.06■□□□□ 0
TRBV6-4A0A1B0GX49 ME2-210ENST00000639255 2262 ntTSL 5 BASIC15.06■□□□□ 0
TRBV6-4A0A1B0GX49 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRBV6-4A0A1B0GX49 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC15.06■□□□□ 0
TRBV6-4A0A1B0GX49 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRBV6-4A0A1B0GX49 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRBV6-4A0A1B0GX49 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
TRBV6-4A0A1B0GX49 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC15.05■□□□□ 0
TRBV6-4A0A1B0GX49 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC15.05■□□□□ 0
TRBV6-4A0A1B0GX49 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ 0
TRBV6-4A0A1B0GX49 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC15.05■□□□□ 0
TRBV6-4A0A1B0GX49 AC007375.3-201ENST00000600936 2314 ntBASIC15.05■□□□□ 0
TRBV6-4A0A1B0GX49 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC15.05■□□□□ 0
TRBV6-4A0A1B0GX49 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
TRBV6-4A0A1B0GX49 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRBV6-4A0A1B0GX49 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC15.05■□□□□ -0
TRBV6-4A0A1B0GX49 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC15.05■□□□□ -0
TRBV6-4A0A1B0GX49 AC008764.7-201ENST00000593779 1081 ntBASIC15.05■□□□□ -0
TRBV6-4A0A1B0GX49 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
TRBV6-4A0A1B0GX49 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRBV6-4A0A1B0GX49 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
TRBV6-4A0A1B0GX49 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC15.05■□□□□ -0
TRBV6-4A0A1B0GX49 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
TRBV6-4A0A1B0GX49 AC026471.6-201ENST00000622954 1905 ntBASIC15.05■□□□□ -0
TRBV6-4A0A1B0GX49 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRBV6-4A0A1B0GX49 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRBV6-4A0A1B0GX49 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
TRBV6-4A0A1B0GX49 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRBV6-4A0A1B0GX49 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC15.04■□□□□ -0
TRBV6-4A0A1B0GX49 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC15.04■□□□□ -0
TRBV6-4A0A1B0GX49 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRBV6-4A0A1B0GX49 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRBV6-4A0A1B0GX49 AC099791.1-201ENST00000416440 715 ntBASIC15.04■□□□□ -0
TRBV6-4A0A1B0GX49 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC15.04■□□□□ -0
TRBV6-4A0A1B0GX49 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC15.04■□□□□ -0
TRBV6-4A0A1B0GX49 GRAMD4P4-201ENST00000613563 1115 ntBASIC15.04■□□□□ -0
TRBV6-4A0A1B0GX49 AL355001.2-201ENST00000620617 1191 ntBASIC15.04■□□□□ -0
TRBV6-4A0A1B0GX49 AC026310.3-201ENST00000625186 2373 ntBASIC15.04■□□□□ -0
TRBV6-4A0A1B0GX49 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC15.04■□□□□ -0
TRBV6-4A0A1B0GX49 Z98882.1-201ENST00000622160 2253 ntBASIC15.04■□□□□ -0
TRBV6-4A0A1B0GX49 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC15.04■□□□□ -0
TRBV6-4A0A1B0GX49 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
TRBV6-4A0A1B0GX49 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRBV6-4A0A1B0GX49 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC15.03■□□□□ -0
TRBV6-4A0A1B0GX49 MFF-203ENST00000349901 1716 ntTSL 2 BASIC15.03■□□□□ -0
TRBV6-4A0A1B0GX49 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRBV6-4A0A1B0GX49 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRBV6-4A0A1B0GX49 AP006587.3-201ENST00000525742 1516 ntBASIC15.03■□□□□ -0
TRBV6-4A0A1B0GX49 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRBV6-4A0A1B0GX49 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
TRBV6-4A0A1B0GX49 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRBV6-4A0A1B0GX49 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRBV6-4A0A1B0GX49 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRBV6-4A0A1B0GX49 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC15.03■□□□□ -0
TRBV6-4A0A1B0GX49 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC15.03■□□□□ -0
TRBV6-4A0A1B0GX49 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRBV6-4A0A1B0GX49 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TRBV6-4A0A1B0GX49 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRBV6-4A0A1B0GX49 LHPP-203ENST00000392757 840 ntTSL 3 BASIC15.03■□□□□ -0
TRBV6-4A0A1B0GX49 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
TRBV6-4A0A1B0GX49 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TRBV6-4A0A1B0GX49 GRAMD4P2-201ENST00000423297 1097 ntBASIC15.03■□□□□ -0
TRBV6-4A0A1B0GX49 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
TRBV6-4A0A1B0GX49 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRBV6-4A0A1B0GX49 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRBV6-4A0A1B0GX49 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
TRBV6-4A0A1B0GX49 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TRBV6-4A0A1B0GX49 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRBV6-4A0A1B0GX49 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRBV6-4A0A1B0GX49 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRBV6-4A0A1B0GX49 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC15.03■□□□□ -0
TRBV6-4A0A1B0GX49 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC15.03■□□□□ -0
TRBV6-4A0A1B0GX49 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
TRBV6-4A0A1B0GX49 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
TRBV6-4A0A1B0GX49 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRBV6-4A0A1B0GX49 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC15.02■□□□□ -0
TRBV6-4A0A1B0GX49 AC009237.3-201ENST00000393279 1427 ntBASIC15.02■□□□□ -0
TRBV6-4A0A1B0GX49 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC15.02■□□□□ -0
TRBV6-4A0A1B0GX49 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC15.02■□□□□ -0
TRBV6-4A0A1B0GX49 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC15.02■□□□□ -0
TRBV6-4A0A1B0GX49 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC15.02■□□□□ -0
TRBV6-4A0A1B0GX49 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC15.02■□□□□ -0
TRBV6-4A0A1B0GX49 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRBV6-4A0A1B0GX49 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRBV6-4A0A1B0GX49 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRBV6-4A0A1B0GX49 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms