Protein–RNA interactions for Protein: A0A0J9YX44

TRBV5-5, T-cell receptor beta variable 5-5 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-5A0A0J9YX44 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
TRBV5-5A0A0J9YX44 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRBV5-5A0A0J9YX44 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRBV5-5A0A0J9YX44 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRBV5-5A0A0J9YX44 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRBV5-5A0A0J9YX44 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRBV5-5A0A0J9YX44 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRBV5-5A0A0J9YX44 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRBV5-5A0A0J9YX44 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRBV5-5A0A0J9YX44 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRBV5-5A0A0J9YX44 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRBV5-5A0A0J9YX44 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
TRBV5-5A0A0J9YX44 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRBV5-5A0A0J9YX44 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC18.53■□□□□ 0.56
TRBV5-5A0A0J9YX44 UNC93B8-201ENST00000511903 705 ntBASIC18.53■□□□□ 0.56
TRBV5-5A0A0J9YX44 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC18.53■□□□□ 0.56
TRBV5-5A0A0J9YX44 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC18.53■□□□□ 0.56
TRBV5-5A0A0J9YX44 AC099791.2-201ENST00000605725 427 ntBASIC18.53■□□□□ 0.56
TRBV5-5A0A0J9YX44 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
TRBV5-5A0A0J9YX44 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRBV5-5A0A0J9YX44 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.53■□□□□ 0.56
TRBV5-5A0A0J9YX44 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.53■□□□□ 0.56
TRBV5-5A0A0J9YX44 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.53■□□□□ 0.56
TRBV5-5A0A0J9YX44 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRBV5-5A0A0J9YX44 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRBV5-5A0A0J9YX44 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.53■□□□□ 0.56
TRBV5-5A0A0J9YX44 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
TRBV5-5A0A0J9YX44 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRBV5-5A0A0J9YX44 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRBV5-5A0A0J9YX44 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.52■□□□□ 0.56
TRBV5-5A0A0J9YX44 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.52■□□□□ 0.56
TRBV5-5A0A0J9YX44 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRBV5-5A0A0J9YX44 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRBV5-5A0A0J9YX44 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRBV5-5A0A0J9YX44 FEM1AP1-201ENST00000431297 1995 ntBASIC18.52■□□□□ 0.56
TRBV5-5A0A0J9YX44 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRBV5-5A0A0J9YX44 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
TRBV5-5A0A0J9YX44 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.52■□□□□ 0.56
TRBV5-5A0A0J9YX44 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
TRBV5-5A0A0J9YX44 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRBV5-5A0A0J9YX44 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC18.52■□□□□ 0.56
TRBV5-5A0A0J9YX44 AL034346.1-201ENST00000568244 1277 ntBASIC18.52■□□□□ 0.56
TRBV5-5A0A0J9YX44 MIR3181-201ENST00000578512 73 ntBASIC18.52■□□□□ 0.56
TRBV5-5A0A0J9YX44 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC18.52■□□□□ 0.56
TRBV5-5A0A0J9YX44 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRBV5-5A0A0J9YX44 LINC01006-201ENST00000333319 2292 ntBASIC18.52■□□□□ 0.55
TRBV5-5A0A0J9YX44 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.55
TRBV5-5A0A0J9YX44 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRBV5-5A0A0J9YX44 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRBV5-5A0A0J9YX44 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.52■□□□□ 0.55
TRBV5-5A0A0J9YX44 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.52■□□□□ 0.55
TRBV5-5A0A0J9YX44 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.52■□□□□ 0.55
TRBV5-5A0A0J9YX44 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRBV5-5A0A0J9YX44 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRBV5-5A0A0J9YX44 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRBV5-5A0A0J9YX44 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRBV5-5A0A0J9YX44 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
TRBV5-5A0A0J9YX44 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRBV5-5A0A0J9YX44 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC18.51■□□□□ 0.55
TRBV5-5A0A0J9YX44 AC009299.2-201ENST00000482477 511 ntBASIC18.51■□□□□ 0.55
TRBV5-5A0A0J9YX44 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
TRBV5-5A0A0J9YX44 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRBV5-5A0A0J9YX44 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
TRBV5-5A0A0J9YX44 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRBV5-5A0A0J9YX44 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRBV5-5A0A0J9YX44 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
TRBV5-5A0A0J9YX44 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
TRBV5-5A0A0J9YX44 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRBV5-5A0A0J9YX44 AC003102.1-202ENST00000563394 1796 ntBASIC18.5■□□□□ 0.55
TRBV5-5A0A0J9YX44 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRBV5-5A0A0J9YX44 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRBV5-5A0A0J9YX44 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRBV5-5A0A0J9YX44 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.5■□□□□ 0.55
TRBV5-5A0A0J9YX44 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRBV5-5A0A0J9YX44 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRBV5-5A0A0J9YX44 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRBV5-5A0A0J9YX44 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC18.5■□□□□ 0.55
TRBV5-5A0A0J9YX44 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC18.5■□□□□ 0.55
TRBV5-5A0A0J9YX44 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRBV5-5A0A0J9YX44 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC18.5■□□□□ 0.55
TRBV5-5A0A0J9YX44 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC18.5■□□□□ 0.55
TRBV5-5A0A0J9YX44 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRBV5-5A0A0J9YX44 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
TRBV5-5A0A0J9YX44 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
TRBV5-5A0A0J9YX44 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRBV5-5A0A0J9YX44 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.5■□□□□ 0.55
TRBV5-5A0A0J9YX44 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
TRBV5-5A0A0J9YX44 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
TRBV5-5A0A0J9YX44 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRBV5-5A0A0J9YX44 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRBV5-5A0A0J9YX44 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRBV5-5A0A0J9YX44 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRBV5-5A0A0J9YX44 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRBV5-5A0A0J9YX44 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRBV5-5A0A0J9YX44 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
TRBV5-5A0A0J9YX44 AK3-203ENST00000447596 705 ntTSL 2 BASIC18.49■□□□□ 0.55
TRBV5-5A0A0J9YX44 CREM-229ENST00000474362 1030 ntTSL 2 BASIC18.49■□□□□ 0.55
TRBV5-5A0A0J9YX44 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRBV5-5A0A0J9YX44 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC18.49■□□□□ 0.55
TRBV5-5A0A0J9YX44 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms