Protein–RNA interactions for Protein: A0A0C4DH55

IGKV3D-7, Immunoglobulin kappa variable 3D-7, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-7A0A0C4DH55 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
IGKV3D-7A0A0C4DH55 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC13.38□□□□□ -0.27
IGKV3D-7A0A0C4DH55 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
IGKV3D-7A0A0C4DH55 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
IGKV3D-7A0A0C4DH55 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
IGKV3D-7A0A0C4DH55 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
IGKV3D-7A0A0C4DH55 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
IGKV3D-7A0A0C4DH55 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
IGKV3D-7A0A0C4DH55 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC13.38□□□□□ -0.27
IGKV3D-7A0A0C4DH55 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
IGKV3D-7A0A0C4DH55 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
IGKV3D-7A0A0C4DH55 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
IGKV3D-7A0A0C4DH55 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
IGKV3D-7A0A0C4DH55 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC13.37□□□□□ -0.27
IGKV3D-7A0A0C4DH55 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
IGKV3D-7A0A0C4DH55 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
IGKV3D-7A0A0C4DH55 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC13.37□□□□□ -0.27
IGKV3D-7A0A0C4DH55 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
IGKV3D-7A0A0C4DH55 DUX4L28-201ENST00000623687 678 ntBASIC13.37□□□□□ -0.27
IGKV3D-7A0A0C4DH55 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
IGKV3D-7A0A0C4DH55 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
IGKV3D-7A0A0C4DH55 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC13.37□□□□□ -0.27
IGKV3D-7A0A0C4DH55 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
IGKV3D-7A0A0C4DH55 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
IGKV3D-7A0A0C4DH55 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
IGKV3D-7A0A0C4DH55 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
IGKV3D-7A0A0C4DH55 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC13.36□□□□□ -0.27
IGKV3D-7A0A0C4DH55 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
IGKV3D-7A0A0C4DH55 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
IGKV3D-7A0A0C4DH55 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
IGKV3D-7A0A0C4DH55 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
IGKV3D-7A0A0C4DH55 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
IGKV3D-7A0A0C4DH55 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
IGKV3D-7A0A0C4DH55 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC13.36□□□□□ -0.27
IGKV3D-7A0A0C4DH55 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC13.36□□□□□ -0.27
IGKV3D-7A0A0C4DH55 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
IGKV3D-7A0A0C4DH55 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
IGKV3D-7A0A0C4DH55 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
IGKV3D-7A0A0C4DH55 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
IGKV3D-7A0A0C4DH55 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
IGKV3D-7A0A0C4DH55 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
IGKV3D-7A0A0C4DH55 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
IGKV3D-7A0A0C4DH55 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
IGKV3D-7A0A0C4DH55 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
IGKV3D-7A0A0C4DH55 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
IGKV3D-7A0A0C4DH55 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
IGKV3D-7A0A0C4DH55 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
IGKV3D-7A0A0C4DH55 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
IGKV3D-7A0A0C4DH55 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
IGKV3D-7A0A0C4DH55 FZD10-202ENST00000539839 3282 ntBASIC13.35□□□□□ -0.27
IGKV3D-7A0A0C4DH55 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
IGKV3D-7A0A0C4DH55 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
IGKV3D-7A0A0C4DH55 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC13.35□□□□□ -0.27
IGKV3D-7A0A0C4DH55 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
IGKV3D-7A0A0C4DH55 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
IGKV3D-7A0A0C4DH55 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC13.35□□□□□ -0.27
IGKV3D-7A0A0C4DH55 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
IGKV3D-7A0A0C4DH55 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
IGKV3D-7A0A0C4DH55 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
IGKV3D-7A0A0C4DH55 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
IGKV3D-7A0A0C4DH55 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
IGKV3D-7A0A0C4DH55 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC13.35□□□□□ -0.27
IGKV3D-7A0A0C4DH55 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
IGKV3D-7A0A0C4DH55 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
IGKV3D-7A0A0C4DH55 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
IGKV3D-7A0A0C4DH55 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
IGKV3D-7A0A0C4DH55 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
IGKV3D-7A0A0C4DH55 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
IGKV3D-7A0A0C4DH55 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
IGKV3D-7A0A0C4DH55 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
IGKV3D-7A0A0C4DH55 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
IGKV3D-7A0A0C4DH55 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC13.34□□□□□ -0.27
IGKV3D-7A0A0C4DH55 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
IGKV3D-7A0A0C4DH55 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
IGKV3D-7A0A0C4DH55 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC13.34□□□□□ -0.27
IGKV3D-7A0A0C4DH55 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
IGKV3D-7A0A0C4DH55 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
IGKV3D-7A0A0C4DH55 AC244015.2-201ENST00000616358 1861 ntBASIC13.34□□□□□ -0.27
IGKV3D-7A0A0C4DH55 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
IGKV3D-7A0A0C4DH55 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
IGKV3D-7A0A0C4DH55 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
IGKV3D-7A0A0C4DH55 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC13.34□□□□□ -0.27
IGKV3D-7A0A0C4DH55 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
IGKV3D-7A0A0C4DH55 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
IGKV3D-7A0A0C4DH55 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
IGKV3D-7A0A0C4DH55 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
IGKV3D-7A0A0C4DH55 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
IGKV3D-7A0A0C4DH55 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
IGKV3D-7A0A0C4DH55 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
IGKV3D-7A0A0C4DH55 EI24-213ENST00000618552 1747 ntTSL 5 BASIC13.33□□□□□ -0.27
IGKV3D-7A0A0C4DH55 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC13.33□□□□□ -0.27
IGKV3D-7A0A0C4DH55 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
IGKV3D-7A0A0C4DH55 AL359258.2-201ENST00000564063 1566 ntBASIC13.33□□□□□ -0.28
IGKV3D-7A0A0C4DH55 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
IGKV3D-7A0A0C4DH55 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
IGKV3D-7A0A0C4DH55 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
IGKV3D-7A0A0C4DH55 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
IGKV3D-7A0A0C4DH55 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
IGKV3D-7A0A0C4DH55 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC13.33□□□□□ -0.28
IGKV3D-7A0A0C4DH55 FEM1AP1-201ENST00000431297 1995 ntBASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms