Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 RALB-208ENST00000631312 311 ntTSL 5 BASIC18.9■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 AC105233.4-201ENST00000642045 216 ntBASIC18.9■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.89■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.89■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.89■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.89■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 MIR572-201ENST00000384983 95 ntBASIC18.88■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.88■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.88■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.88■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.88■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.87■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.87■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.87■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 AC142381.2-201ENST00000566120 298 ntBASIC18.87■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 AC005229.4-201ENST00000610085 2198 ntBASIC18.87■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 AC005837.3-201ENST00000612163 286 ntBASIC18.87■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.86■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.86■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.86■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 AC104564.3-201ENST00000582367 638 ntBASIC18.86■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.86■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.86■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 AF106564.1-201ENST00000607058 2553 ntBASIC18.86■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.85■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.85■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.85■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 MIR638-201ENST00000385237 100 ntBASIC18.85■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.85■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.85■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.85■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.85■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.84■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.84■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.84■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.84■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.84■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.84■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.84■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.84■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
IGKV1D-43A0A0B4J1Z2 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms