Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC187A0A096LP49 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.31■□□□□ 0.84
CCDC187A0A096LP49 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.31■□□□□ 0.84
CCDC187A0A096LP49 ITM2C-210ENST00000620962 501 ntBASIC20.31■□□□□ 0.84
CCDC187A0A096LP49 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.31■□□□□ 0.84
CCDC187A0A096LP49 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.31■□□□□ 0.84
CCDC187A0A096LP49 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC187A0A096LP49 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC187A0A096LP49 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC187A0A096LP49 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC187A0A096LP49 LINC00526-201ENST00000581067 1875 ntBASIC20.3■□□□□ 0.84
CCDC187A0A096LP49 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC187A0A096LP49 KRT18P29-201ENST00000397031 1267 ntBASIC20.3■□□□□ 0.84
CCDC187A0A096LP49 AL512625.2-201ENST00000417533 625 ntBASIC20.3■□□□□ 0.84
CCDC187A0A096LP49 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC187A0A096LP49 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC187A0A096LP49 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.3■□□□□ 0.84
CCDC187A0A096LP49 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC187A0A096LP49 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC187A0A096LP49 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC187A0A096LP49 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC187A0A096LP49 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC187A0A096LP49 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC187A0A096LP49 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC187A0A096LP49 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
CCDC187A0A096LP49 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC187A0A096LP49 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC187A0A096LP49 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC187A0A096LP49 AC008687.6-201ENST00000596318 630 ntBASIC20.29■□□□□ 0.84
CCDC187A0A096LP49 AC008175.2-201ENST00000612840 297 ntBASIC20.29■□□□□ 0.84
CCDC187A0A096LP49 AC092118.2-201ENST00000613495 667 ntBASIC20.29■□□□□ 0.84
CCDC187A0A096LP49 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.29■□□□□ 0.84
CCDC187A0A096LP49 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
CCDC187A0A096LP49 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.29■□□□□ 0.84
CCDC187A0A096LP49 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC187A0A096LP49 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
CCDC187A0A096LP49 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC187A0A096LP49 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC187A0A096LP49 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC187A0A096LP49 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC187A0A096LP49 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.28■□□□□ 0.84
CCDC187A0A096LP49 AC093827.2-201ENST00000512654 315 ntBASIC20.28■□□□□ 0.84
CCDC187A0A096LP49 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.28■□□□□ 0.84
CCDC187A0A096LP49 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC187A0A096LP49 AC016405.3-201ENST00000607710 860 ntBASIC20.28■□□□□ 0.84
CCDC187A0A096LP49 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC187A0A096LP49 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC187A0A096LP49 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC187A0A096LP49 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC187A0A096LP49 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CCDC187A0A096LP49 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC187A0A096LP49 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC187A0A096LP49 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC187A0A096LP49 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC187A0A096LP49 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC187A0A096LP49 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC187A0A096LP49 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC187A0A096LP49 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.27■□□□□ 0.84
CCDC187A0A096LP49 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
CCDC187A0A096LP49 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC187A0A096LP49 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.27■□□□□ 0.84
CCDC187A0A096LP49 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC187A0A096LP49 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC187A0A096LP49 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.27■□□□□ 0.84
CCDC187A0A096LP49 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC187A0A096LP49 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.27■□□□□ 0.84
CCDC187A0A096LP49 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.27■□□□□ 0.84
CCDC187A0A096LP49 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC187A0A096LP49 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CCDC187A0A096LP49 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CCDC187A0A096LP49 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CCDC187A0A096LP49 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CCDC187A0A096LP49 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC187A0A096LP49 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC187A0A096LP49 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.26■□□□□ 0.83
CCDC187A0A096LP49 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC187A0A096LP49 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC187A0A096LP49 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
CCDC187A0A096LP49 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
CCDC187A0A096LP49 AC093787.1-201ENST00000450396 207 ntBASIC20.26■□□□□ 0.83
CCDC187A0A096LP49 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.26■□□□□ 0.83
CCDC187A0A096LP49 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.26■□□□□ 0.83
CCDC187A0A096LP49 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CCDC187A0A096LP49 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CCDC187A0A096LP49 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.26■□□□□ 0.83
CCDC187A0A096LP49 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC187A0A096LP49 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.26■□□□□ 0.83
CCDC187A0A096LP49 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC187A0A096LP49 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC187A0A096LP49 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC187A0A096LP49 POU5F1P4-201ENST00000413175 1085 ntBASIC20.25■□□□□ 0.83
CCDC187A0A096LP49 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC187A0A096LP49 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.25■□□□□ 0.83
CCDC187A0A096LP49 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.25■□□□□ 0.83
CCDC187A0A096LP49 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.25■□□□□ 0.83
CCDC187A0A096LP49 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.25■□□□□ 0.83
CCDC187A0A096LP49 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC187A0A096LP49 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC187A0A096LP49 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC187A0A096LP49 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms