Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 MUC20P1-201ENST00000457750 1680 ntBASIC12.24□□□□□ -0.45
LMO3Q8TAP4 HFE-209ENST00000461397 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
LMO3Q8TAP4 TAF6-213ENST00000472509 2551 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LMO3Q8TAP4 SELENOT-205ENST00000485923 1078 ntTSL 5 BASIC12.24□□□□□ -0.45
LMO3Q8TAP4 AC018797.2-201ENST00000501133 883 ntTSL 2 BASIC12.24□□□□□ -0.45
LMO3Q8TAP4 AC074344.2-201ENST00000502846 565 ntTSL 5 BASIC12.24□□□□□ -0.45
LMO3Q8TAP4 AC108174.1-201ENST00000504916 745 ntTSL 3 BASIC12.24□□□□□ -0.45
LMO3Q8TAP4 POU5F1-206ENST00000513407 2276 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LMO3Q8TAP4 AC011676.4-201ENST00000523604 413 ntTSL 3 BASIC12.24□□□□□ -0.45
LMO3Q8TAP4 NDUFS8-210ENST00000528492 353 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LMO3Q8TAP4 RPL38-206ENST00000533498 532 ntAPPRIS P2 TSL 2 BASIC12.24□□□□□ -0.45
LMO3Q8TAP4 ACRBP-204ENST00000536350 1053 ntTSL 2 BASIC12.24□□□□□ -0.45
LMO3Q8TAP4 CORO2B-202ENST00000540068 3332 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
LMO3Q8TAP4 FTLP5-201ENST00000586853 534 ntBASIC12.24□□□□□ -0.45
LMO3Q8TAP4 AC061992.1-202ENST00000587575 490 ntTSL 3 BASIC12.24□□□□□ -0.45
LMO3Q8TAP4 LINC02371-201ENST00000613818 567 ntTSL 4 BASIC12.24□□□□□ -0.45
LMO3Q8TAP4 PRAMEF8-203ENST00000621519 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LMO3Q8TAP4 AC002511.3-201ENST00000638098 420 ntBASIC12.24□□□□□ -0.45
LMO3Q8TAP4 NFE4-202ENST00000638942 962 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
LMO3Q8TAP4 TSPAN9-201ENST00000011898 4323 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LMO3Q8TAP4 DDR1-227ENST00000376570 3820 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
LMO3Q8TAP4 ZNF648-201ENST00000339948 3649 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LMO3Q8TAP4 SGK1-204ENST00000367858 3201 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LMO3Q8TAP4 STRADA-201ENST00000245865 2959 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LMO3Q8TAP4 EXOC7-216ENST00000589210 4751 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LMO3Q8TAP4 LINC01879-201ENST00000611889 2338 ntTSL 2 BASIC12.23□□□□□ -0.45
LMO3Q8TAP4 ZNF655-204ENST00000394163 4528 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
LMO3Q8TAP4 AL391421.1-201ENST00000372387 1922 ntTSL 2 BASIC12.23□□□□□ -0.45
LMO3Q8TAP4 PRAMEF8-201ENST00000357367 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LMO3Q8TAP4 MC1R-203ENST00000555427 3637 ntTSL 5 BASIC12.23□□□□□ -0.45
LMO3Q8TAP4 SECISBP2-209ENST00000534113 3584 ntTSL 2 BASIC12.23□□□□□ -0.45
LMO3Q8TAP4 MCAM-201ENST00000264036 3313 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LMO3Q8TAP4 CDH5-201ENST00000341529 4120 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LMO3Q8TAP4 DRD1-201ENST00000393752 4054 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
LMO3Q8TAP4 AL139220.2-207ENST00000434244 2644 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
LMO3Q8TAP4 PCGF2-207ENST00000620225 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LMO3Q8TAP4 NLRC3-202ENST00000359128 6401 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LMO3Q8TAP4 SNORA65-201ENST00000364432 130 ntBASIC12.23□□□□□ -0.45
LMO3Q8TAP4 MGST3-204ENST00000367888 778 ntTSL 3 BASIC12.23□□□□□ -0.45
LMO3Q8TAP4 USF1-201ENST00000368019 998 ntTSL 5 BASIC12.23□□□□□ -0.45
LMO3Q8TAP4 MIR193A-201ENST00000384882 88 ntBASIC12.23□□□□□ -0.45
LMO3Q8TAP4 BANF1P2-201ENST00000430526 264 ntBASIC12.23□□□□□ -0.45
LMO3Q8TAP4 CFL1P2-201ENST00000440986 684 ntBASIC12.23□□□□□ -0.45
LMO3Q8TAP4 CHCHD2P6-201ENST00000454346 447 ntBASIC12.23□□□□□ -0.45
LMO3Q8TAP4 KRTAP21-4P-201ENST00000454921 816 ntBASIC12.23□□□□□ -0.45
LMO3Q8TAP4 AL583824.1-203ENST00000457948 761 ntTSL 2 BASIC12.23□□□□□ -0.45
LMO3Q8TAP4 RN7SL26P-201ENST00000460792 307 ntBASIC12.23□□□□□ -0.45
LMO3Q8TAP4 STEAP2-AS1-202ENST00000478318 627 ntTSL 3 BASIC12.23□□□□□ -0.45
LMO3Q8TAP4 SLC25A5P6-201ENST00000515328 886 ntBASIC12.23□□□□□ -0.45
LMO3Q8TAP4 ARL1-209ENST00000551671 879 ntTSL 2 BASIC12.23□□□□□ -0.45
LMO3Q8TAP4 AC013391.2-201ENST00000559041 501 ntTSL 5 BASIC12.23□□□□□ -0.45
LMO3Q8TAP4 AC027279.2-201ENST00000561938 793 ntTSL 5 BASIC12.23□□□□□ -0.45
LMO3Q8TAP4 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
LMO3Q8TAP4 AP001059.2-201ENST00000620163 449 ntBASIC12.23□□□□□ -0.45
LMO3Q8TAP4 AC073911.2-201ENST00000624989 468 ntBASIC12.23□□□□□ -0.45
LMO3Q8TAP4 TROAP-201ENST00000257909 2527 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
LMO3Q8TAP4 TRMT10A-201ENST00000273962 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LMO3Q8TAP4 SMIM8-204ENST00000392863 2437 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LMO3Q8TAP4 MROH7-TTC4-201ENST00000414150 5867 ntAPPRIS P5 TSL 2 BASIC12.23□□□□□ -0.45
LMO3Q8TAP4 SPATA3-AS1-201ENST00000414876 3508 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
LMO3Q8TAP4 SEC23B-204ENST00000377475 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LMO3Q8TAP4 TIAM2-206ENST00000456877 3275 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
LMO3Q8TAP4 RIPOR1-205ENST00000540839 4260 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
LMO3Q8TAP4 RRN3P2-202ENST00000564580 2132 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
LMO3Q8TAP4 CR2-201ENST00000367057 4240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
LMO3Q8TAP4 ASPH-203ENST00000379454 5268 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
LMO3Q8TAP4 CRP-201ENST00000255030 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LMO3Q8TAP4 AL592164.1-201ENST00000562814 1976 ntTSL 3 BASIC12.23□□□□□ -0.45
LMO3Q8TAP4 TMBIM1-214ENST00000444881 2936 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
LMO3Q8TAP4 FGFR1-208ENST00000397108 2870 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LMO3Q8TAP4 RSPH10B-208ENST00000539903 2881 ntTSL 5 BASIC12.23□□□□□ -0.45
LMO3Q8TAP4 AMIGO2-203ENST00000550413 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LMO3Q8TAP4 ZNF436-202ENST00000374608 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LMO3Q8TAP4 ZBTB1-203ENST00000554015 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LMO3Q8TAP4 PPP2R1A-205ENST00000462990 2730 ntTSL 2 BASIC12.23□□□□□ -0.45
LMO3Q8TAP4 LDB3-205ENST00000429277 5436 ntTSL 2 BASIC12.23□□□□□ -0.45
LMO3Q8TAP4 MRO-204ENST00000431965 1657 ntTSL 2 BASIC12.22□□□□□ -0.45
LMO3Q8TAP4 KIAA1191-213ENST00000620366 2452 ntTSL 3 BASIC12.22□□□□□ -0.45
LMO3Q8TAP4 RAD52-204ENST00000430095 2366 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
LMO3Q8TAP4 PCBP1-AS1-227ENST00000435880 2386 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LMO3Q8TAP4 TRPM6-201ENST00000359047 1568 ntTSL 5 BASIC12.22□□□□□ -0.45
LMO3Q8TAP4 BCOR-204ENST00000378463 2230 ntTSL 5 BASIC12.22□□□□□ -0.45
LMO3Q8TAP4 PTPN20-207ENST00000395725 2226 ntTSL 5 BASIC12.22□□□□□ -0.45
LMO3Q8TAP4 AC009120.6-201ENST00000616116 1460 ntBASIC12.22□□□□□ -0.45
LMO3Q8TAP4 MAGED2-202ENST00000347546 2177 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
LMO3Q8TAP4 STAG1-203ENST00000434713 5064 ntTSL 5 BASIC12.22□□□□□ -0.45
LMO3Q8TAP4 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LMO3Q8TAP4 HSPH1-204ENST00000445273 4987 ntTSL 2 BASIC12.22□□□□□ -0.45
LMO3Q8TAP4 LINC01845-201ENST00000518418 2012 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LMO3Q8TAP4 MTUS2-206ENST00000612955 7430 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
LMO3Q8TAP4 TCP10L-201ENST00000300258 2695 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
LMO3Q8TAP4 DOCK10-201ENST00000258390 7260 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
LMO3Q8TAP4 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
LMO3Q8TAP4 SON-203ENST00000381679 7860 ntTSL 5 BASIC12.22□□□□□ -0.45
LMO3Q8TAP4 MCEE-201ENST00000244217 835 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LMO3Q8TAP4 KRTAP20-1-201ENST00000334664 275 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
LMO3Q8TAP4 RNA5SP370-201ENST00000362545 121 ntBASIC12.22□□□□□ -0.45
LMO3Q8TAP4 KRTAP2-1-201ENST00000391419 776 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
LMO3Q8TAP4 AL022722.1-201ENST00000406333 582 ntBASIC12.22□□□□□ -0.45
LMO3Q8TAP4 SFXN5-202ENST00000410065 840 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms