Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 DUSP27-203ENST00000443333 4034 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
LMO3Q8TAP4 CBWD3-206ENST00000478048 1736 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LMO3Q8TAP4 AP4B1-203ENST00000369567 2144 ntTSL 2 BASIC12.31□□□□□ -0.44
LMO3Q8TAP4 ZNF57-203ENST00000523428 1774 ntTSL 2 BASIC12.3□□□□□ -0.44
LMO3Q8TAP4 IDH1-201ENST00000345146 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LMO3Q8TAP4 PCDHGA9-202ENST00000616887 2568 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
LMO3Q8TAP4 CDKL2-202ENST00000429927 3383 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
LMO3Q8TAP4 ADGRG5-202ENST00000349457 3557 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LMO3Q8TAP4 RGS3-207ENST00000374140 4591 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
LMO3Q8TAP4 C10orf53-203ENST00000374113 2415 ntTSL 2 BASIC12.3□□□□□ -0.44
LMO3Q8TAP4 AC092145.1-201ENST00000564809 2434 ntBASIC12.3□□□□□ -0.44
LMO3Q8TAP4 AC099521.2-201ENST00000619354 2036 ntBASIC12.3□□□□□ -0.44
LMO3Q8TAP4 CLUHP3-201ENST00000254109 1812 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LMO3Q8TAP4 EIF4BP7-201ENST00000432307 1813 ntBASIC12.3□□□□□ -0.44
LMO3Q8TAP4 AL139005.1-201ENST00000623899 1635 ntBASIC12.3□□□□□ -0.44
LMO3Q8TAP4 PRAMEF34P-201ENST00000611860 1447 ntBASIC12.3□□□□□ -0.44
LMO3Q8TAP4 KIAA0319-205ENST00000543707 5314 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
LMO3Q8TAP4 IDO2-204ENST00000502986 2294 ntTSL 5 BASIC12.3□□□□□ -0.44
LMO3Q8TAP4 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
LMO3Q8TAP4 AC090124.3-201ENST00000265458 1673 ntBASIC12.3□□□□□ -0.44
LMO3Q8TAP4 TBX3-201ENST00000257566 4208 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LMO3Q8TAP4 ABL1-202ENST00000372348 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LMO3Q8TAP4 LINC00951-201ENST00000373171 554 ntTSL 2 BASIC12.3□□□□□ -0.44
LMO3Q8TAP4 OLA1P2-201ENST00000395519 1264 ntBASIC12.3□□□□□ -0.44
LMO3Q8TAP4 AL355298.1-201ENST00000425391 180 ntBASIC12.3□□□□□ -0.44
LMO3Q8TAP4 LINC01716-201ENST00000434176 698 ntTSL 3 BASIC12.3□□□□□ -0.44
LMO3Q8TAP4 ATP5G1P7-201ENST00000444398 400 ntBASIC12.3□□□□□ -0.44
LMO3Q8TAP4 RN7SL674P-201ENST00000463397 275 ntBASIC12.3□□□□□ -0.44
LMO3Q8TAP4 AC117402.1-201ENST00000485473 856 ntTSL 3 BASIC12.3□□□□□ -0.44
LMO3Q8TAP4 SLED1-201ENST00000506741 751 ntBASIC12.3□□□□□ -0.44
LMO3Q8TAP4 RPL27A-208ENST00000530913 805 ntTSL 2 BASIC12.3□□□□□ -0.44
LMO3Q8TAP4 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC12.3□□□□□ -0.44
LMO3Q8TAP4 AC099524.1-205ENST00000562180 674 ntTSL 5 BASIC12.3□□□□□ -0.44
LMO3Q8TAP4 AC023389.1-201ENST00000577846 576 ntTSL 4 BASIC12.3□□□□□ -0.44
LMO3Q8TAP4 RN7SL217P-201ENST00000584520 286 ntBASIC12.3□□□□□ -0.44
LMO3Q8TAP4 CTBP2P7-201ENST00000593270 1244 ntBASIC12.3□□□□□ -0.44
LMO3Q8TAP4 IGHV2-70-201ENST00000617374 358 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
LMO3Q8TAP4 RN7SL1-201ENST00000618786 299 ntBASIC12.3□□□□□ -0.44
LMO3Q8TAP4 AC244093.4-201ENST00000620689 710 ntTSL 5 BASIC12.3□□□□□ -0.44
LMO3Q8TAP4 UNC45B-203ENST00000591048 2553 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LMO3Q8TAP4 ADPRH-204ENST00000478399 4546 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LMO3Q8TAP4 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC12.3□□□□□ -0.44
LMO3Q8TAP4 EFCAB12-201ENST00000326085 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LMO3Q8TAP4 EFCAB12-204ENST00000505956 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LMO3Q8TAP4 LVRN-201ENST00000357872 4581 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LMO3Q8TAP4 ZNF572-201ENST00000319286 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LMO3Q8TAP4 TBC1D26-213ENST00000612583 1978 ntTSL 5 BASIC12.3□□□□□ -0.44
LMO3Q8TAP4 DLAT-202ENST00000393051 3517 ntTSL 5 BASIC12.3□□□□□ -0.44
LMO3Q8TAP4 TAF1A-AS1-201ENST00000413074 1313 ntTSL 2 BASIC12.3□□□□□ -0.44
LMO3Q8TAP4 RAB29-204ENST00000437324 1306 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LMO3Q8TAP4 NAA16-202ENST00000403412 1751 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LMO3Q8TAP4 SLC12A3-201ENST00000262502 4208 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
LMO3Q8TAP4 TK2-206ENST00000527800 2687 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LMO3Q8TAP4 MEF2D-204ENST00000464356 5598 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
LMO3Q8TAP4 TCTN2-201ENST00000303372 2912 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
LMO3Q8TAP4 PTPN20-204ENST00000374346 2481 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LMO3Q8TAP4 PABPC1P11-201ENST00000428966 2007 ntBASIC12.3□□□□□ -0.44
LMO3Q8TAP4 APBA2-204ENST00000558259 3635 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LMO3Q8TAP4 TCAIM-205ENST00000417237 1844 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
LMO3Q8TAP4 SLC26A8-208ENST00000490799 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LMO3Q8TAP4 SPIN3-223ENST00000639525 3958 ntTSL 5 BASIC12.29□□□□□ -0.44
LMO3Q8TAP4 ST6GALNAC1-201ENST00000156626 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LMO3Q8TAP4 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC12.29□□□□□ -0.44
LMO3Q8TAP4 RORC-202ENST00000356728 3050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
LMO3Q8TAP4 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LMO3Q8TAP4 STAT3-211ENST00000585517 3319 ntTSL 5 BASIC12.29□□□□□ -0.44
LMO3Q8TAP4 LINC01166-201ENST00000443633 2619 ntTSL 2 BASIC12.29□□□□□ -0.44
LMO3Q8TAP4 TNPO1-213ENST00000523768 2632 ntTSL 2 BASIC12.29□□□□□ -0.44
LMO3Q8TAP4 XRCC4-201ENST00000282268 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LMO3Q8TAP4 PAX7-203ENST00000420770 5538 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LMO3Q8TAP4 TXNRD1-206ENST00000524698 1933 ntAPPRIS P2 TSL 2 BASIC12.29□□□□□ -0.44
LMO3Q8TAP4 APTX-208ENST00000436040 2168 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
LMO3Q8TAP4 TPTE-204ENST00000618007 2150 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
LMO3Q8TAP4 OR11A1-204ENST00000641152 2440 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
LMO3Q8TAP4 MRVI1-202ENST00000424001 5815 ntTSL 5 BASIC12.29□□□□□ -0.44
LMO3Q8TAP4 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
LMO3Q8TAP4 TM9SF2-201ENST00000376387 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LMO3Q8TAP4 EIF4B-202ENST00000416762 1985 ntTSL 2 BASIC12.29□□□□□ -0.44
LMO3Q8TAP4 VSTM5-202ENST00000409977 2969 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
LMO3Q8TAP4 JUP-201ENST00000310706 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LMO3Q8TAP4 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
LMO3Q8TAP4 ZNF16-209ENST00000611477 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LMO3Q8TAP4 AC008764.9-201ENST00000624284 2505 ntBASIC12.29□□□□□ -0.44
LMO3Q8TAP4 PLA2G1B-201ENST00000308366 565 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LMO3Q8TAP4 JPT2-203ENST00000382711 894 ntTSL 4 BASIC12.29□□□□□ -0.44
LMO3Q8TAP4 IGKV2D-26-201ENST00000390268 390 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
LMO3Q8TAP4 FXYD5-203ENST00000392218 763 ntTSL 3 BASIC12.29□□□□□ -0.44
LMO3Q8TAP4 EMP1-202ENST00000396301 675 ntTSL 2 BASIC12.29□□□□□ -0.44
LMO3Q8TAP4 SLC6A1-AS1-201ENST00000414969 584 ntTSL 4 BASIC12.29□□□□□ -0.44
LMO3Q8TAP4 SWI5-204ENST00000419867 1048 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LMO3Q8TAP4 VN1R64P-201ENST00000424940 933 ntBASIC12.29□□□□□ -0.44
LMO3Q8TAP4 AL355472.3-201ENST00000425104 410 ntTSL 3 BASIC12.29□□□□□ -0.44
LMO3Q8TAP4 AC097523.1-201ENST00000429515 637 ntBASIC12.29□□□□□ -0.44
LMO3Q8TAP4 ST3GAL6-207ENST00000468553 715 ntTSL 3 BASIC12.29□□□□□ -0.44
LMO3Q8TAP4 RN7SL60P-201ENST00000476209 299 ntBASIC12.29□□□□□ -0.44
LMO3Q8TAP4 LRRC75A-AS1-208ENST00000480811 968 ntTSL 2 BASIC12.29□□□□□ -0.44
LMO3Q8TAP4 RPSAP5-201ENST00000485258 884 ntBASIC12.29□□□□□ -0.44
LMO3Q8TAP4 AC074134.1-201ENST00000503901 1108 ntBASIC12.29□□□□□ -0.44
LMO3Q8TAP4 SLA-206ENST00000517648 896 ntTSL 2 BASIC12.29□□□□□ -0.44
LMO3Q8TAP4 PINX1-203ENST00000519088 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms