Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 MYH9-201ENST00000216181 7501 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
NPIPA3F8WFD2 EXTL2-207ENST00000535414 3146 ntTSL 5 BASIC10.67□□□□□ -0.7
NPIPA3F8WFD2 RMI2-202ENST00000572173 1865 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
NPIPA3F8WFD2 CATSPERG-202ENST00000409235 3746 ntAPPRIS P3 TSL 5 BASIC10.67□□□□□ -0.7
NPIPA3F8WFD2 COL14A1-202ENST00000297848 6466 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
NPIPA3F8WFD2 ZNHIT6-201ENST00000370574 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
NPIPA3F8WFD2 SMG7-212ENST00000507469 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
NPIPA3F8WFD2 CPEB3-202ENST00000412050 7664 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
NPIPA3F8WFD2 EPHA5-201ENST00000273854 8266 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
NPIPA3F8WFD2 AL645608.3-201ENST00000448179 3043 ntTSL 2 BASIC10.67□□□□□ -0.7
NPIPA3F8WFD2 ACLY-204ENST00000537919 2974 ntTSL 2 BASIC10.67□□□□□ -0.7
NPIPA3F8WFD2 GRM4-206ENST00000544773 2983 ntTSL 2 BASIC10.67□□□□□ -0.7
NPIPA3F8WFD2 FXR1-220ENST00000491062 1768 ntTSL 2 BASIC10.67□□□□□ -0.7
NPIPA3F8WFD2 TRERF1-202ENST00000354325 4138 ntTSL 5 BASIC10.67□□□□□ -0.7
NPIPA3F8WFD2 AIF1L-207ENST00000372309 3515 ntTSL 2 BASIC10.67□□□□□ -0.7
NPIPA3F8WFD2 SEMA3F-206ENST00000434342 3541 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
NPIPA3F8WFD2 LINC00880-201ENST00000471357 2018 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
NPIPA3F8WFD2 TRAK1-202ENST00000341421 4620 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
NPIPA3F8WFD2 HMOX2-203ENST00000406590 1727 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
NPIPA3F8WFD2 HECTD4-202ENST00000377560 15759 ntAPPRIS P5 TSL 5 BASIC10.67□□□□□ -0.7
NPIPA3F8WFD2 NTM-206ENST00000427481 2583 ntTSL 5 BASIC10.67□□□□□ -0.7
NPIPA3F8WFD2 SRSF5-205ENST00000553635 1412 ntTSL 2 BASIC10.67□□□□□ -0.7
NPIPA3F8WFD2 PSG3-201ENST00000327495 1961 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
NPIPA3F8WFD2 SLC7A6OS-201ENST00000263997 4189 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
NPIPA3F8WFD2 HMGB1-206ENST00000405805 4199 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
NPIPA3F8WFD2 ORAI2-201ENST00000356387 10811 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
NPIPA3F8WFD2 RGN-201ENST00000336169 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
NPIPA3F8WFD2 NDUFA5-201ENST00000355749 1901 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
NPIPA3F8WFD2 FAM90A3P-201ENST00000506444 1395 ntBASIC10.66□□□□□ -0.7
NPIPA3F8WFD2 FAM90A4P-201ENST00000509856 1395 ntBASIC10.66□□□□□ -0.7
NPIPA3F8WFD2 FAM90A18P-201ENST00000527117 1395 ntBASIC10.66□□□□□ -0.7
NPIPA3F8WFD2 FAM90A20P-201ENST00000528221 1395 ntBASIC10.66□□□□□ -0.7
NPIPA3F8WFD2 FAM90A10P-201ENST00000530206 1395 ntBASIC10.66□□□□□ -0.7
NPIPA3F8WFD2 FAM90A19P-201ENST00000533611 1395 ntBASIC10.66□□□□□ -0.7
NPIPA3F8WFD2 AL355607.2-201ENST00000563268 1395 ntTSL 5 BASIC10.66□□□□□ -0.7
NPIPA3F8WFD2 LITAF-221ENST00000622633 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
NPIPA3F8WFD2 SVEP1-201ENST00000374461 3257 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
NPIPA3F8WFD2 CEP83-203ENST00000397809 3773 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
NPIPA3F8WFD2 MIEF1-203ENST00000404569 3797 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
NPIPA3F8WFD2 GBAP1-201ENST00000368374 1873 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
NPIPA3F8WFD2 SEPT2-204ENST00000391973 3701 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
NPIPA3F8WFD2 ZBED4-201ENST00000216268 6893 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
NPIPA3F8WFD2 MGLL-203ENST00000398104 4235 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
NPIPA3F8WFD2 ACIN1-223ENST00000605057 4474 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
NPIPA3F8WFD2 RBMY1F-202ENST00000454978 1810 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
NPIPA3F8WFD2 SYN3-202ENST00000358763 3126 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
NPIPA3F8WFD2 PDE4DIP-219ENST00000524974 8305 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
NPIPA3F8WFD2 USP3-202ENST00000380324 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
NPIPA3F8WFD2 ATP8A1-201ENST00000264449 8209 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
NPIPA3F8WFD2 MRVI1-214ENST00000534266 2824 ntTSL 2 BASIC10.66□□□□□ -0.7
NPIPA3F8WFD2 GZMH-201ENST00000216338 909 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
NPIPA3F8WFD2 PI3-201ENST00000243924 577 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
NPIPA3F8WFD2 IFNA6-201ENST00000259555 704 ntBASIC10.66□□□□□ -0.7
NPIPA3F8WFD2 TPM3-202ENST00000302206 741 ntTSL 3 BASIC10.66□□□□□ -0.7
NPIPA3F8WFD2 OOEP-202ENST00000370363 1007 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
NPIPA3F8WFD2 CRPP1-201ENST00000412857 625 ntBASIC10.66□□□□□ -0.7
NPIPA3F8WFD2 OR13E1P-201ENST00000417104 922 ntBASIC10.66□□□□□ -0.7
NPIPA3F8WFD2 AL031770.1-201ENST00000430842 851 ntTSL 2 BASIC10.66□□□□□ -0.7
NPIPA3F8WFD2 TXNDC9-205ENST00000434323 733 ntTSL 5 BASIC10.66□□□□□ -0.7
NPIPA3F8WFD2 MAP1LC3BP1-202ENST00000438342 516 ntTSL 3 BASIC10.66□□□□□ -0.7
NPIPA3F8WFD2 ANKRD20A11P-205ENST00000442192 920 ntTSL 3 BASIC10.66□□□□□ -0.7
NPIPA3F8WFD2 PLA2G6-213ENST00000447598 567 ntTSL 5 BASIC10.66□□□□□ -0.7
NPIPA3F8WFD2 SLC25A38P1-201ENST00000458247 943 ntBASIC10.66□□□□□ -0.7
NPIPA3F8WFD2 LINC01210-204ENST00000478772 1288 ntTSL 5 BASIC10.66□□□□□ -0.7
NPIPA3F8WFD2 ZNF331-218ENST00000513265 739 ntTSL 3 BASIC10.66□□□□□ -0.7
NPIPA3F8WFD2 UTP23-203ENST00000517820 796 ntTSL 3 BASIC10.66□□□□□ -0.7
NPIPA3F8WFD2 CD63-207ENST00000548898 727 ntTSL 2 BASIC10.66□□□□□ -0.7
NPIPA3F8WFD2 AL359220.1-201ENST00000554086 781 ntTSL 3 BASIC10.66□□□□□ -0.7
NPIPA3F8WFD2 TREML3P-202ENST00000564680 978 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
NPIPA3F8WFD2 AC008870.3-201ENST00000566143 641 ntBASIC10.66□□□□□ -0.7
NPIPA3F8WFD2 AL365205.3-201ENST00000593368 169 ntBASIC10.66□□□□□ -0.7
NPIPA3F8WFD2 AP001877.1-201ENST00000611253 484 ntBASIC10.66□□□□□ -0.7
NPIPA3F8WFD2 MIR6753-201ENST00000617169 164 ntBASIC10.66□□□□□ -0.7
NPIPA3F8WFD2 AC073264.4-201ENST00000638055 623 ntBASIC10.66□□□□□ -0.7
NPIPA3F8WFD2 NAMPT-201ENST00000222553 4582 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
NPIPA3F8WFD2 CHTF8P1-201ENST00000414660 1541 ntBASIC10.66□□□□□ -0.7
NPIPA3F8WFD2 PIK3AP1-202ENST00000371109 1766 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
NPIPA3F8WFD2 ATP8B5P-204ENST00000439972 2522 ntTSL 2 BASIC10.66□□□□□ -0.7
NPIPA3F8WFD2 SH2D7-201ENST00000328828 2750 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
NPIPA3F8WFD2 WNK4-201ENST00000246914 4001 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
NPIPA3F8WFD2 SLC13A3-201ENST00000279027 4017 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
NPIPA3F8WFD2 CFAP65-202ENST00000341552 5953 ntAPPRIS P4 TSL 5 BASIC10.66□□□□□ -0.7
NPIPA3F8WFD2 KCNMB1-202ENST00000521859 1733 ntTSL 2 BASIC10.66□□□□□ -0.7
NPIPA3F8WFD2 AL133467.2-201ENST00000555032 1714 ntTSL 4 BASIC10.66□□□□□ -0.7
NPIPA3F8WFD2 IL1RL2-203ENST00000441515 1484 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
NPIPA3F8WFD2 NPR2-201ENST00000342694 3686 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
NPIPA3F8WFD2 ARHGEF10L-203ENST00000375408 3685 ntTSL 5 BASIC10.66□□□□□ -0.7
NPIPA3F8WFD2 ICOSLG-204ENST00000407780 7080 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
NPIPA3F8WFD2 PLOD2-209ENST00000494950 2908 ntTSL 2 BASIC10.66□□□□□ -0.7
NPIPA3F8WFD2 AC093642.2-201ENST00000625132 4805 ntBASIC10.66□□□□□ -0.7
NPIPA3F8WFD2 ZNF8-201ENST00000621650 9128 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
NPIPA3F8WFD2 CTSK-201ENST00000271651 1692 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
NPIPA3F8WFD2 PROS1-202ENST00000394236 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
NPIPA3F8WFD2 PMEPA1-203ENST00000347215 4546 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
NPIPA3F8WFD2 TRAPPC9-202ENST00000438773 4297 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
NPIPA3F8WFD2 SEC24B-AS1-202ENST00000499713 1433 ntTSL 5 BASIC10.66□□□□□ -0.7
NPIPA3F8WFD2 AC027020.2-201ENST00000602585 2389 ntBASIC10.66□□□□□ -0.7
NPIPA3F8WFD2 CAMTA2-208ENST00000572543 4496 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
NPIPA3F8WFD2 AC022384.1-202ENST00000450534 2831 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
NPIPA3F8WFD2 AL583810.2-201ENST00000556430 3254 ntBASIC10.66□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 135.7 ms