Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 OR2C1-201ENST00000304936 1406 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
LMO3Q8TAP4 MED8-203ENST00000372457 1924 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
LMO3Q8TAP4 DNM3-206ENST00000520906 4454 ntTSL 2 BASIC12.35□□□□□ -0.43
LMO3Q8TAP4 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LMO3Q8TAP4 COG2-202ENST00000366669 2921 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
LMO3Q8TAP4 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
LMO3Q8TAP4 BDNF-218ENST00000533246 4000 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LMO3Q8TAP4 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LMO3Q8TAP4 FAM131A-201ENST00000310585 3677 ntTSL 2 BASIC12.34□□□□□ -0.43
LMO3Q8TAP4 ECD-201ENST00000372979 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LMO3Q8TAP4 RHBDL3-201ENST00000269051 4661 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
LMO3Q8TAP4 PKD2-205ENST00000508588 1720 ntTSL 2 BASIC12.34□□□□□ -0.43
LMO3Q8TAP4 NAP1L1-210ENST00000547773 1967 ntTSL 5 BASIC12.34□□□□□ -0.43
LMO3Q8TAP4 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC12.34□□□□□ -0.43
LMO3Q8TAP4 CCDC57-205ENST00000392346 2964 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
LMO3Q8TAP4 C4orf3-201ENST00000399075 2960 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
LMO3Q8TAP4 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LMO3Q8TAP4 FBXW8-202ENST00000455858 4648 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LMO3Q8TAP4 SLC12A4-204ENST00000541864 3627 ntTSL 2 BASIC12.34□□□□□ -0.43
LMO3Q8TAP4 SIDT2-220ENST00000628876 2609 ntTSL 5 BASIC12.34□□□□□ -0.43
LMO3Q8TAP4 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LMO3Q8TAP4 WDR82-201ENST00000296490 4293 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LMO3Q8TAP4 ADIPOR2-201ENST00000357103 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LMO3Q8TAP4 PADI4-201ENST00000375448 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LMO3Q8TAP4 DAPK1-213ENST00000491893 4186 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LMO3Q8TAP4 POTEE-205ENST00000626191 2027 ntTSL 2 BASIC12.34□□□□□ -0.43
LMO3Q8TAP4 DEDD-210ENST00000490843 1527 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
LMO3Q8TAP4 CCL24-201ENST00000222902 582 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LMO3Q8TAP4 SNORA80B-201ENST00000383906 136 ntBASIC12.34□□□□□ -0.43
LMO3Q8TAP4 HNRNPA3P3-201ENST00000416838 1137 ntBASIC12.34□□□□□ -0.43
LMO3Q8TAP4 AC074397.1-201ENST00000418013 1010 ntBASIC12.34□□□□□ -0.43
LMO3Q8TAP4 LINC01494-201ENST00000419511 1011 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LMO3Q8TAP4 CGGBP1-203ENST00000462901 1063 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LMO3Q8TAP4 IL12A-202ENST00000466512 1283 ntTSL 3 BASIC12.34□□□□□ -0.43
LMO3Q8TAP4 IL12A-205ENST00000480787 863 ntTSL 3 BASIC12.34□□□□□ -0.43
LMO3Q8TAP4 AC016612.1-201ENST00000505367 289 ntBASIC12.34□□□□□ -0.43
LMO3Q8TAP4 AC009238.3-201ENST00000512705 217 ntBASIC12.34□□□□□ -0.43
LMO3Q8TAP4 AF186192.1-201ENST00000525376 572 ntBASIC12.34□□□□□ -0.43
LMO3Q8TAP4 AC084033.3-203ENST00000546580 571 ntTSL 2 BASIC12.34□□□□□ -0.43
LMO3Q8TAP4 FOS-205ENST00000555242 629 ntTSL 2 BASIC12.34□□□□□ -0.43
LMO3Q8TAP4 CHORDC2P-201ENST00000557601 1090 ntBASIC12.34□□□□□ -0.43
LMO3Q8TAP4 MIR4713HG-201ENST00000559909 561 ntTSL 4 BASIC12.34□□□□□ -0.43
LMO3Q8TAP4 AC098617.1-207ENST00000594591 810 ntTSL 5 BASIC12.34□□□□□ -0.43
LMO3Q8TAP4 BNIP3P28-201ENST00000603918 1193 ntBASIC12.34□□□□□ -0.43
LMO3Q8TAP4 AC010385.3-201ENST00000614250 162 ntBASIC12.34□□□□□ -0.43
LMO3Q8TAP4 AL935212.4-201ENST00000618569 232 ntBASIC12.34□□□□□ -0.43
LMO3Q8TAP4 AC007786.2-201ENST00000618791 803 ntBASIC12.34□□□□□ -0.43
LMO3Q8TAP4 AL359741.1-201ENST00000621262 225 ntBASIC12.34□□□□□ -0.43
LMO3Q8TAP4 SDCBP2-AS1-204ENST00000609470 2158 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LMO3Q8TAP4 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
LMO3Q8TAP4 RFX6-201ENST00000332958 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LMO3Q8TAP4 USP14-203ENST00000400266 1681 ntTSL 2 BASIC12.34□□□□□ -0.43
LMO3Q8TAP4 SLC18A1-205ENST00000440926 2956 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
LMO3Q8TAP4 RALYL-205ENST00000521268 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
LMO3Q8TAP4 SUPT5H-201ENST00000359191 3770 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LMO3Q8TAP4 LOXL2-201ENST00000389131 3549 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LMO3Q8TAP4 UBE2L3-202ENST00000458578 3007 ntTSL 2 BASIC12.34□□□□□ -0.43
LMO3Q8TAP4 CNBD2-202ENST00000373973 1956 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
LMO3Q8TAP4 TCAIM-202ENST00000383746 1998 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LMO3Q8TAP4 MFSD6-202ENST00000392328 4797 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
LMO3Q8TAP4 PCCB-214ENST00000478469 4502 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LMO3Q8TAP4 IPO13-202ENST00000372343 3894 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LMO3Q8TAP4 DHRS1-202ENST00000396813 1470 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
LMO3Q8TAP4 CHID1-204ENST00000449825 3537 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
LMO3Q8TAP4 RHOXF2B-201ENST00000371402 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LMO3Q8TAP4 NUTM2B-202ENST00000372321 3970 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
LMO3Q8TAP4 GBA-203ENST00000427500 2063 ntTSL 2 BASIC12.33□□□□□ -0.44
LMO3Q8TAP4 SIRPB1-202ENST00000279477 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
LMO3Q8TAP4 DPY19L2P2-204ENST00000438364 3947 ntTSL 2 BASIC12.33□□□□□ -0.44
LMO3Q8TAP4 GOSR2-237ENST00000640443 3929 ntTSL 5 BASIC12.33□□□□□ -0.44
LMO3Q8TAP4 ZNF527-202ENST00000436120 2828 ntAPPRIS P1 TSL 4 BASIC12.33□□□□□ -0.44
LMO3Q8TAP4 C22orf31-201ENST00000216071 995 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LMO3Q8TAP4 MLN-201ENST00000266003 527 ntTSL 5 BASIC12.33□□□□□ -0.44
LMO3Q8TAP4 PRDX2-201ENST00000301522 987 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LMO3Q8TAP4 KRTAP19-2-201ENST00000334055 380 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
LMO3Q8TAP4 IGKV3D-20-201ENST00000390270 445 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
LMO3Q8TAP4 LINC00544-201ENST00000400540 1031 ntTSL 5 BASIC12.33□□□□□ -0.44
LMO3Q8TAP4 IGKV3-20-201ENST00000492167 400 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
LMO3Q8TAP4 RASGRF2-AS1-202ENST00000505694 535 ntTSL 3 BASIC12.33□□□□□ -0.44
LMO3Q8TAP4 AP001922.6-201ENST00000532553 546 ntTSL 5 BASIC12.33□□□□□ -0.44
LMO3Q8TAP4 snoZ6.3-201ENST00000583496 76 ntBASIC12.33□□□□□ -0.44
LMO3Q8TAP4 PSME3-213ENST00000592169 826 ntTSL 3 BASIC12.33□□□□□ -0.44
LMO3Q8TAP4 AC244102.2-201ENST00000597568 955 ntBASIC12.33□□□□□ -0.44
LMO3Q8TAP4 AC007992.2-201ENST00000604771 835 ntBASIC12.33□□□□□ -0.44
LMO3Q8TAP4 SLIRP-212ENST00000613856 420 ntAPPRIS ALT1 TSL 2 BASIC12.33□□□□□ -0.44
LMO3Q8TAP4 TARM1-202ENST00000616041 1218 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
LMO3Q8TAP4 DPP4-211ENST00000628861 433 ntTSL 5 BASIC12.33□□□□□ -0.44
LMO3Q8TAP4 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
LMO3Q8TAP4 IP6K2-219ENST00000446860 1565 ntTSL 2 BASIC12.33□□□□□ -0.44
LMO3Q8TAP4 CR2-203ENST00000367059 3877 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LMO3Q8TAP4 DLGAP1-212ENST00000515196 5314 ntTSL 2 BASIC12.33□□□□□ -0.44
LMO3Q8TAP4 ANKRD36-206ENST00000620383 1884 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
LMO3Q8TAP4 MPP2-220ENST00000622681 4242 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
LMO3Q8TAP4 ANKRD20A2-201ENST00000377601 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LMO3Q8TAP4 TMEM81-201ENST00000367167 1332 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
LMO3Q8TAP4 RTN1-203ENST00000395090 1609 ntTSL 2 BASIC12.33□□□□□ -0.44
LMO3Q8TAP4 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
LMO3Q8TAP4 C1orf147-201ENST00000367119 2096 ntTSL 2 BASIC12.33□□□□□ -0.44
LMO3Q8TAP4 URM1-203ENST00000372853 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LMO3Q8TAP4 GRHL3-203ENST00000356046 2804 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms