Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 DHRS1-202ENST00000396813 1470 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
NPIPA3F8WFD2 PPIL3-204ENST00000409361 897 ntTSL 3 BASIC10.71□□□□□ -0.69
NPIPA3F8WFD2 AC004231.1-201ENST00000418393 815 ntTSL 5 BASIC10.71□□□□□ -0.69
NPIPA3F8WFD2 EIF4B-203ENST00000420463 1936 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.69
NPIPA3F8WFD2 SLC2A1-203ENST00000426263 3667 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
NPIPA3F8WFD2 HLCS-IT1-201ENST00000434195 531 ntTSL 2 BASIC10.71□□□□□ -0.69
NPIPA3F8WFD2 AL683813.1-201ENST00000435597 3018 ntTSL 2 BASIC10.71□□□□□ -0.69
NPIPA3F8WFD2 AL359504.1-201ENST00000448052 493 ntBASIC10.71□□□□□ -0.69
NPIPA3F8WFD2 AP000522.1-201ENST00000448070 121 ntBASIC10.71□□□□□ -0.69
NPIPA3F8WFD2 SURF6P1-201ENST00000451854 827 ntBASIC10.71□□□□□ -0.69
NPIPA3F8WFD2 BTNL2-203ENST00000454136 1460 ntAPPRIS P2 TSL 5 BASIC10.71□□□□□ -0.69
NPIPA3F8WFD2 AC005534.1-201ENST00000455709 742 ntTSL 2 BASIC10.71□□□□□ -0.69
NPIPA3F8WFD2 RIBC1-204ENST00000457095 1949 ntTSL 2 BASIC10.71□□□□□ -0.69
NPIPA3F8WFD2 MRPS22-202ENST00000465056 1099 ntAPPRIS ALT1 TSL 5 BASIC10.71□□□□□ -0.69
NPIPA3F8WFD2 ARHGAP25-207ENST00000467265 2247 ntTSL 2 BASIC10.71□□□□□ -0.69
NPIPA3F8WFD2 DDX4-212ENST00000514278 2451 ntTSL 5 BASIC10.71□□□□□ -0.69
NPIPA3F8WFD2 AC022784.6-203ENST00000520255 863 ntTSL 3 BASIC10.71□□□□□ -0.69
NPIPA3F8WFD2 AC004241.1-201ENST00000547799 3299 ntTSL 5 BASIC10.71□□□□□ -0.69
NPIPA3F8WFD2 AC115102.1-201ENST00000558044 487 ntTSL 5 BASIC10.71□□□□□ -0.69
NPIPA3F8WFD2 AL354993.2-201ENST00000558738 542 ntTSL 4 BASIC10.71□□□□□ -0.69
NPIPA3F8WFD2 EIF3C-204ENST00000564243 2870 ntTSL 2 BASIC10.71□□□□□ -0.69
NPIPA3F8WFD2 AC105036.3-204ENST00000568707 789 ntTSL 2 BASIC10.71□□□□□ -0.69
NPIPA3F8WFD2 ELOA-203ENST00000609199 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
NPIPA3F8WFD2 VPS45-212ENST00000611412 2064 ntTSL 5 BASIC10.71□□□□□ -0.69
NPIPA3F8WFD2 AL117190.3-201ENST00000621821 87 ntBASIC10.71□□□□□ -0.69
NPIPA3F8WFD2 MAEL-206ENST00000622874 1700 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
NPIPA3F8WFD2 LINC02210-CRHR1-202ENST00000634540 2695 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
NPIPA3F8WFD2 ZNF614-201ENST00000270649 4818 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
NPIPA3F8WFD2 FAM193A-202ENST00000382839 4710 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
NPIPA3F8WFD2 AVL9-202ENST00000409301 4336 ntTSL 5 BASIC10.71□□□□□ -0.7
NPIPA3F8WFD2 RD3-201ENST00000367002 4266 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
NPIPA3F8WFD2 ARMCX3-201ENST00000341189 3730 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
NPIPA3F8WFD2 AL445647.1-201ENST00000606221 3599 ntBASIC10.71□□□□□ -0.7
NPIPA3F8WFD2 ARSK-201ENST00000380009 3354 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
NPIPA3F8WFD2 DLGAP4-203ENST00000373907 3337 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
NPIPA3F8WFD2 SLC22A12-204ENST00000377574 3206 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
NPIPA3F8WFD2 PHACTR4-202ENST00000373839 6190 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
NPIPA3F8WFD2 THAP9-AS1-202ENST00000504520 2770 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
NPIPA3F8WFD2 PIPSL-202ENST00000489875 2733 ntBASIC10.71□□□□□ -0.7
NPIPA3F8WFD2 AGPAT4-203ENST00000366911 7705 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
NPIPA3F8WFD2 AC092611.1-201ENST00000514269 2565 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
NPIPA3F8WFD2 ZNF792-202ENST00000605484 2567 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
NPIPA3F8WFD2 CXorf56-201ENST00000320339 2372 ntTSL 2 BASIC10.7□□□□□ -0.7
NPIPA3F8WFD2 RPH3A-201ENST00000389385 4679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
NPIPA3F8WFD2 HDAC8-214ENST00000439122 2338 ntTSL 2 BASIC10.7□□□□□ -0.7
NPIPA3F8WFD2 PLD5-208ENST00000536534 8721 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
NPIPA3F8WFD2 TCN2-205ENST00000450638 2159 ntAPPRIS ALT2 TSL 3 BASIC10.7□□□□□ -0.7
NPIPA3F8WFD2 CELF4-203ENST00000420428 4052 ntAPPRIS P3 TSL 5 BASIC10.7□□□□□ -0.7
NPIPA3F8WFD2 AC091948.1-201ENST00000501695 2033 ntTSL 2 BASIC10.7□□□□□ -0.7
NPIPA3F8WFD2 PPT1-219ENST00000642050 4010 ntAPPRIS P2 BASIC10.7□□□□□ -0.7
NPIPA3F8WFD2 PHKB-208ENST00000566044 3829 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
NPIPA3F8WFD2 TCN2-203ENST00000407817 1870 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
NPIPA3F8WFD2 NOS3-203ENST00000461406 3644 ntTSL 2 BASIC10.7□□□□□ -0.7
NPIPA3F8WFD2 ATP1A3-208ENST00000545399 3618 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
NPIPA3F8WFD2 AC090061.1-201ENST00000500695 1733 ntTSL 5 BASIC10.7□□□□□ -0.7
NPIPA3F8WFD2 HSPA14-202ENST00000437161 1689 ntTSL 2 BASIC10.7□□□□□ -0.7
NPIPA3F8WFD2 OTOG-203ENST00000399397 9948 ntAPPRIS P3 TSL 5 BASIC10.7□□□□□ -0.7
NPIPA3F8WFD2 NCR1-205ENST00000594765 1612 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
NPIPA3F8WFD2 SEPT4-204ENST00000412945 1597 ntAPPRIS ALT2 TSL 2 BASIC10.7□□□□□ -0.7
NPIPA3F8WFD2 AC005696.4-201ENST00000614400 3147 ntBASIC10.7□□□□□ -0.7
NPIPA3F8WFD2 CSMD2-202ENST00000338325 1544 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
NPIPA3F8WFD2 PPP4R1L-201ENST00000244070 1474 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
NPIPA3F8WFD2 MARK3-201ENST00000216288 2911 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
NPIPA3F8WFD2 ATL2-204ENST00000406122 2864 ntTSL 5 BASIC10.7□□□□□ -0.7
NPIPA3F8WFD2 IFT81-209ENST00000552912 2710 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
NPIPA3F8WFD2 KIR2DP1-201ENST00000415311 1331 ntBASIC10.7□□□□□ -0.7
NPIPA3F8WFD2 FN1-205ENST00000357867 7898 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
NPIPA3F8WFD2 LY6D-201ENST00000301263 804 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
NPIPA3F8WFD2 UQCRH-201ENST00000311672 604 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
NPIPA3F8WFD2 ZNF140-201ENST00000319849 596 ntTSL 5 BASIC10.7□□□□□ -0.7
NPIPA3F8WFD2 ATP6V1G2-206ENST00000376151 1261 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
NPIPA3F8WFD2 HLA-DQA1-203ENST00000395363 1206 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
NPIPA3F8WFD2 AL355802.1-201ENST00000417591 990 ntTSL 3 BASIC10.7□□□□□ -0.7
NPIPA3F8WFD2 PGAM1P2-201ENST00000436071 725 ntBASIC10.7□□□□□ -0.7
NPIPA3F8WFD2 HUNK-AS1-201ENST00000437109 616 ntTSL 3 BASIC10.7□□□□□ -0.7
NPIPA3F8WFD2 AC062028.2-201ENST00000437876 856 ntBASIC10.7□□□□□ -0.7
NPIPA3F8WFD2 TEX51-204ENST00000450035 736 ntAPPRIS P2 TSL 5 BASIC10.7□□□□□ -0.7
NPIPA3F8WFD2 AL161672.1-201ENST00000450968 818 ntBASIC10.7□□□□□ -0.7
NPIPA3F8WFD2 IL12A-202ENST00000466512 1283 ntTSL 3 BASIC10.7□□□□□ -0.7
NPIPA3F8WFD2 IL12A-205ENST00000480787 863 ntTSL 3 BASIC10.7□□□□□ -0.7
NPIPA3F8WFD2 RN7SL394P-201ENST00000480997 291 ntBASIC10.7□□□□□ -0.7
NPIPA3F8WFD2 RN7SL766P-201ENST00000494719 309 ntBASIC10.7□□□□□ -0.7
NPIPA3F8WFD2 TOMM22P3-201ENST00000498134 345 ntBASIC10.7□□□□□ -0.7
NPIPA3F8WFD2 AC034229.1-201ENST00000506299 943 ntTSL 2 BASIC10.7□□□□□ -0.7
NPIPA3F8WFD2 SLED1-201ENST00000506741 751 ntBASIC10.7□□□□□ -0.7
NPIPA3F8WFD2 LINC00290-201ENST00000512487 593 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
NPIPA3F8WFD2 AC007992.1-201ENST00000513953 953 ntBASIC10.7□□□□□ -0.7
NPIPA3F8WFD2 IGHV3-60-201ENST00000521678 354 ntBASIC10.7□□□□□ -0.7
NPIPA3F8WFD2 AC087441.1-201ENST00000531069 301 ntBASIC10.7□□□□□ -0.7
NPIPA3F8WFD2 DPPA5P4-201ENST00000559021 365 ntBASIC10.7□□□□□ -0.7
NPIPA3F8WFD2 AC104041.1-202ENST00000560097 566 ntTSL 4 BASIC10.7□□□□□ -0.7
NPIPA3F8WFD2 AC026826.2-201ENST00000560455 214 ntBASIC10.7□□□□□ -0.7
NPIPA3F8WFD2 MIR1587-201ENST00000583319 53 ntBASIC10.7□□□□□ -0.7
NPIPA3F8WFD2 AC090844.3-202ENST00000584649 535 ntTSL 4 BASIC10.7□□□□□ -0.7
NPIPA3F8WFD2 AC090826.3-201ENST00000611178 834 ntBASIC10.7□□□□□ -0.7
NPIPA3F8WFD2 LYNX1-205ENST00000620006 868 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
NPIPA3F8WFD2 AC244093.4-201ENST00000620689 710 ntTSL 5 BASIC10.7□□□□□ -0.7
NPIPA3F8WFD2 LINC00969-286ENST00000627297 708 ntTSL 5 BASIC10.7□□□□□ -0.7
NPIPA3F8WFD2 AKAP9-216ENST00000619023 6006 ntTSL 5 BASIC10.7□□□□□ -0.7
NPIPA3F8WFD2 TTLL13P-206ENST00000641754 2256 ntAPPRIS ALT2 BASIC10.7□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms