Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC23.72■■□□□ 1.39
SCN10AQ9Y5Y9 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SCN10AQ9Y5Y9 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC23.72■■□□□ 1.39
SCN10AQ9Y5Y9 PLLP-204ENST00000569059 665 ntTSL 3 BASIC23.72■■□□□ 1.39
SCN10AQ9Y5Y9 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC23.72■■□□□ 1.39
SCN10AQ9Y5Y9 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
SCN10AQ9Y5Y9 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SCN10AQ9Y5Y9 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
SCN10AQ9Y5Y9 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SCN10AQ9Y5Y9 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC23.71■■□□□ 1.39
SCN10AQ9Y5Y9 AC053503.5-201ENST00000601508 636 ntBASIC23.71■■□□□ 1.39
SCN10AQ9Y5Y9 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SCN10AQ9Y5Y9 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SCN10AQ9Y5Y9 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SCN10AQ9Y5Y9 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
SCN10AQ9Y5Y9 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
SCN10AQ9Y5Y9 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC23.71■■□□□ 1.39
SCN10AQ9Y5Y9 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SCN10AQ9Y5Y9 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
SCN10AQ9Y5Y9 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC23.71■■□□□ 1.39
SCN10AQ9Y5Y9 TERF1P5-201ENST00000477545 1207 ntBASIC23.71■■□□□ 1.39
SCN10AQ9Y5Y9 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
SCN10AQ9Y5Y9 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
SCN10AQ9Y5Y9 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC23.7■■□□□ 1.38
SCN10AQ9Y5Y9 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
SCN10AQ9Y5Y9 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
SCN10AQ9Y5Y9 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC23.7■■□□□ 1.38
SCN10AQ9Y5Y9 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
SCN10AQ9Y5Y9 BMP1-204ENST00000397814 836 ntTSL 4 BASIC23.69■■□□□ 1.38
SCN10AQ9Y5Y9 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC23.69■■□□□ 1.38
SCN10AQ9Y5Y9 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
SCN10AQ9Y5Y9 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
SCN10AQ9Y5Y9 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SCN10AQ9Y5Y9 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC23.69■■□□□ 1.38
SCN10AQ9Y5Y9 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC23.69■■□□□ 1.38
SCN10AQ9Y5Y9 AC016405.3-201ENST00000607710 860 ntBASIC23.69■■□□□ 1.38
SCN10AQ9Y5Y9 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC23.68■■□□□ 1.38
SCN10AQ9Y5Y9 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
SCN10AQ9Y5Y9 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
SCN10AQ9Y5Y9 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC23.68■■□□□ 1.38
SCN10AQ9Y5Y9 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
SCN10AQ9Y5Y9 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SCN10AQ9Y5Y9 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC23.68■■□□□ 1.38
SCN10AQ9Y5Y9 AC083880.1-201ENST00000608266 535 ntBASIC23.68■■□□□ 1.38
SCN10AQ9Y5Y9 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
SCN10AQ9Y5Y9 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SCN10AQ9Y5Y9 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SCN10AQ9Y5Y9 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SCN10AQ9Y5Y9 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC23.68■■□□□ 1.38
SCN10AQ9Y5Y9 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SCN10AQ9Y5Y9 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC23.68■■□□□ 1.38
SCN10AQ9Y5Y9 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SCN10AQ9Y5Y9 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC23.68■■□□□ 1.38
SCN10AQ9Y5Y9 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SCN10AQ9Y5Y9 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SCN10AQ9Y5Y9 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC23.67■■□□□ 1.38
SCN10AQ9Y5Y9 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC23.67■■□□□ 1.38
SCN10AQ9Y5Y9 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SCN10AQ9Y5Y9 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC23.67■■□□□ 1.38
SCN10AQ9Y5Y9 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SCN10AQ9Y5Y9 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SCN10AQ9Y5Y9 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
SCN10AQ9Y5Y9 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
SCN10AQ9Y5Y9 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC23.67■■□□□ 1.38
SCN10AQ9Y5Y9 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SCN10AQ9Y5Y9 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC23.67■■□□□ 1.38
SCN10AQ9Y5Y9 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC23.67■■□□□ 1.38
SCN10AQ9Y5Y9 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC23.67■■□□□ 1.38
SCN10AQ9Y5Y9 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
SCN10AQ9Y5Y9 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
SCN10AQ9Y5Y9 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
SCN10AQ9Y5Y9 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC23.66■■□□□ 1.38
SCN10AQ9Y5Y9 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SCN10AQ9Y5Y9 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
SCN10AQ9Y5Y9 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
SCN10AQ9Y5Y9 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC23.66■■□□□ 1.38
SCN10AQ9Y5Y9 PPP1R14BP2-201ENST00000426284 444 ntBASIC23.66■■□□□ 1.38
SCN10AQ9Y5Y9 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
SCN10AQ9Y5Y9 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC23.66■■□□□ 1.38
SCN10AQ9Y5Y9 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SCN10AQ9Y5Y9 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
SCN10AQ9Y5Y9 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SCN10AQ9Y5Y9 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC23.65■■□□□ 1.38
SCN10AQ9Y5Y9 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SCN10AQ9Y5Y9 OR10C1-204ENST00000622521 1039 ntBASIC23.65■■□□□ 1.38
SCN10AQ9Y5Y9 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC23.65■■□□□ 1.38
SCN10AQ9Y5Y9 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SCN10AQ9Y5Y9 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
SCN10AQ9Y5Y9 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SCN10AQ9Y5Y9 AC087742.1-201ENST00000575880 1738 ntBASIC23.65■■□□□ 1.38
SCN10AQ9Y5Y9 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
SCN10AQ9Y5Y9 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC23.65■■□□□ 1.38
SCN10AQ9Y5Y9 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC23.65■■□□□ 1.38
SCN10AQ9Y5Y9 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC23.65■■□□□ 1.38
SCN10AQ9Y5Y9 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
SCN10AQ9Y5Y9 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SCN10AQ9Y5Y9 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
SCN10AQ9Y5Y9 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
SCN10AQ9Y5Y9 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC23.64■■□□□ 1.38
SCN10AQ9Y5Y9 POU5F1P3-201ENST00000428824 1078 ntBASIC23.64■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms