Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
PCDHGA4Q9Y5G9 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21■□□□□ 0.95
PCDHGA4Q9Y5G9 TERF1P2-201ENST00000583350 1212 ntBASIC21■□□□□ 0.95
PCDHGA4Q9Y5G9 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21■□□□□ 0.95
PCDHGA4Q9Y5G9 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21■□□□□ 0.95
PCDHGA4Q9Y5G9 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
PCDHGA4Q9Y5G9 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHGA4Q9Y5G9 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.99■□□□□ 0.95
PCDHGA4Q9Y5G9 LINC02228-203ENST00000641970 1355 ntBASIC20.99■□□□□ 0.95
PCDHGA4Q9Y5G9 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHGA4Q9Y5G9 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHGA4Q9Y5G9 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
PCDHGA4Q9Y5G9 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
PCDHGA4Q9Y5G9 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
PCDHGA4Q9Y5G9 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.99■□□□□ 0.95
PCDHGA4Q9Y5G9 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHGA4Q9Y5G9 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.99■□□□□ 0.95
PCDHGA4Q9Y5G9 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHGA4Q9Y5G9 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
PCDHGA4Q9Y5G9 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHGA4Q9Y5G9 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHGA4Q9Y5G9 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHGA4Q9Y5G9 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHGA4Q9Y5G9 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHGA4Q9Y5G9 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHGA4Q9Y5G9 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.98■□□□□ 0.95
PCDHGA4Q9Y5G9 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHGA4Q9Y5G9 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
PCDHGA4Q9Y5G9 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHGA4Q9Y5G9 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.98■□□□□ 0.95
PCDHGA4Q9Y5G9 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHGA4Q9Y5G9 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
PCDHGA4Q9Y5G9 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.98■□□□□ 0.95
PCDHGA4Q9Y5G9 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHGA4Q9Y5G9 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
PCDHGA4Q9Y5G9 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHGA4Q9Y5G9 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.97■□□□□ 0.95
PCDHGA4Q9Y5G9 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHGA4Q9Y5G9 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHGA4Q9Y5G9 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHGA4Q9Y5G9 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHGA4Q9Y5G9 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHGA4Q9Y5G9 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.97■□□□□ 0.95
PCDHGA4Q9Y5G9 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.97■□□□□ 0.95
PCDHGA4Q9Y5G9 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHGA4Q9Y5G9 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHGA4Q9Y5G9 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHGA4Q9Y5G9 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHGA4Q9Y5G9 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHGA4Q9Y5G9 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHGA4Q9Y5G9 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHGA4Q9Y5G9 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHGA4Q9Y5G9 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.97■□□□□ 0.95
PCDHGA4Q9Y5G9 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHGA4Q9Y5G9 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHGA4Q9Y5G9 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHGA4Q9Y5G9 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHGA4Q9Y5G9 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHGA4Q9Y5G9 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.96■□□□□ 0.95
PCDHGA4Q9Y5G9 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.96■□□□□ 0.95
PCDHGA4Q9Y5G9 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.96■□□□□ 0.95
PCDHGA4Q9Y5G9 HLA-L-209ENST00000420110 1011 ntBASIC20.96■□□□□ 0.95
PCDHGA4Q9Y5G9 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHGA4Q9Y5G9 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.96■□□□□ 0.95
PCDHGA4Q9Y5G9 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.96■□□□□ 0.95
PCDHGA4Q9Y5G9 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.96■□□□□ 0.95
PCDHGA4Q9Y5G9 AC068587.7-201ENST00000641602 218 ntBASIC20.96■□□□□ 0.95
PCDHGA4Q9Y5G9 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHGA4Q9Y5G9 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.96■□□□□ 0.95
PCDHGA4Q9Y5G9 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
PCDHGA4Q9Y5G9 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHGA4Q9Y5G9 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.96■□□□□ 0.95
PCDHGA4Q9Y5G9 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
PCDHGA4Q9Y5G9 AC087742.1-201ENST00000575880 1738 ntBASIC20.95■□□□□ 0.94
PCDHGA4Q9Y5G9 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHGA4Q9Y5G9 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHGA4Q9Y5G9 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.95■□□□□ 0.94
PCDHGA4Q9Y5G9 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHGA4Q9Y5G9 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHGA4Q9Y5G9 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHGA4Q9Y5G9 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
PCDHGA4Q9Y5G9 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.95■□□□□ 0.94
PCDHGA4Q9Y5G9 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHGA4Q9Y5G9 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.95■□□□□ 0.94
PCDHGA4Q9Y5G9 AP005435.1-201ENST00000529293 1178 ntBASIC20.95■□□□□ 0.94
PCDHGA4Q9Y5G9 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.95■□□□□ 0.94
PCDHGA4Q9Y5G9 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.95■□□□□ 0.94
PCDHGA4Q9Y5G9 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHGA4Q9Y5G9 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
PCDHGA4Q9Y5G9 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHGA4Q9Y5G9 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.95■□□□□ 0.94
PCDHGA4Q9Y5G9 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.95■□□□□ 0.94
PCDHGA4Q9Y5G9 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHGA4Q9Y5G9 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
PCDHGA4Q9Y5G9 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHGA4Q9Y5G9 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHGA4Q9Y5G9 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHGA4Q9Y5G9 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
PCDHGA4Q9Y5G9 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.94■□□□□ 0.94
PCDHGA4Q9Y5G9 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms