Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.96■□□□□ 0.95
PCDHB11Q9Y5F2 AC016769.1-201ENST00000409132 1010 ntBASIC20.96■□□□□ 0.95
PCDHB11Q9Y5F2 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.96■□□□□ 0.95
PCDHB11Q9Y5F2 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.96■□□□□ 0.95
PCDHB11Q9Y5F2 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHB11Q9Y5F2 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
PCDHB11Q9Y5F2 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHB11Q9Y5F2 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.96■□□□□ 0.95
PCDHB11Q9Y5F2 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.95■□□□□ 0.95
PCDHB11Q9Y5F2 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHB11Q9Y5F2 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHB11Q9Y5F2 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHB11Q9Y5F2 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHB11Q9Y5F2 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.95■□□□□ 0.94
PCDHB11Q9Y5F2 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHB11Q9Y5F2 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.95■□□□□ 0.94
PCDHB11Q9Y5F2 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
PCDHB11Q9Y5F2 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHB11Q9Y5F2 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHB11Q9Y5F2 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHB11Q9Y5F2 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHB11Q9Y5F2 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
PCDHB11Q9Y5F2 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHB11Q9Y5F2 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.95■□□□□ 0.94
PCDHB11Q9Y5F2 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHB11Q9Y5F2 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.94■□□□□ 0.94
PCDHB11Q9Y5F2 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.94■□□□□ 0.94
PCDHB11Q9Y5F2 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHB11Q9Y5F2 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHB11Q9Y5F2 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHB11Q9Y5F2 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.94■□□□□ 0.94
PCDHB11Q9Y5F2 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.94■□□□□ 0.94
PCDHB11Q9Y5F2 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHB11Q9Y5F2 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
PCDHB11Q9Y5F2 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHB11Q9Y5F2 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.94■□□□□ 0.94
PCDHB11Q9Y5F2 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHB11Q9Y5F2 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHB11Q9Y5F2 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.94■□□□□ 0.94
PCDHB11Q9Y5F2 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHB11Q9Y5F2 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHB11Q9Y5F2 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHB11Q9Y5F2 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHB11Q9Y5F2 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHB11Q9Y5F2 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.93■□□□□ 0.94
PCDHB11Q9Y5F2 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHB11Q9Y5F2 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
PCDHB11Q9Y5F2 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
PCDHB11Q9Y5F2 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.93■□□□□ 0.94
PCDHB11Q9Y5F2 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHB11Q9Y5F2 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.93■□□□□ 0.94
PCDHB11Q9Y5F2 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.93■□□□□ 0.94
PCDHB11Q9Y5F2 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.93■□□□□ 0.94
PCDHB11Q9Y5F2 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.93■□□□□ 0.94
PCDHB11Q9Y5F2 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHB11Q9Y5F2 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
PCDHB11Q9Y5F2 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHB11Q9Y5F2 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHB11Q9Y5F2 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHB11Q9Y5F2 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHB11Q9Y5F2 AC139530.1-201ENST00000575312 1977 ntBASIC20.92■□□□□ 0.94
PCDHB11Q9Y5F2 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHB11Q9Y5F2 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHB11Q9Y5F2 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.92■□□□□ 0.94
PCDHB11Q9Y5F2 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.92■□□□□ 0.94
PCDHB11Q9Y5F2 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHB11Q9Y5F2 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHB11Q9Y5F2 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
PCDHB11Q9Y5F2 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHB11Q9Y5F2 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHB11Q9Y5F2 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHB11Q9Y5F2 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.92■□□□□ 0.94
PCDHB11Q9Y5F2 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHB11Q9Y5F2 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHB11Q9Y5F2 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHB11Q9Y5F2 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.91■□□□□ 0.94
PCDHB11Q9Y5F2 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
PCDHB11Q9Y5F2 HLA-L-209ENST00000420110 1011 ntBASIC20.91■□□□□ 0.94
PCDHB11Q9Y5F2 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
PCDHB11Q9Y5F2 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
PCDHB11Q9Y5F2 OR7E47P-201ENST00000546390 1422 ntBASIC20.91■□□□□ 0.94
PCDHB11Q9Y5F2 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.91■□□□□ 0.94
PCDHB11Q9Y5F2 AC137761.2-201ENST00000561729 223 ntBASIC20.91■□□□□ 0.94
PCDHB11Q9Y5F2 AC145350.3-201ENST00000569033 163 ntBASIC20.91■□□□□ 0.94
PCDHB11Q9Y5F2 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHB11Q9Y5F2 AC080038.1-201ENST00000611274 1154 ntBASIC20.91■□□□□ 0.94
PCDHB11Q9Y5F2 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.91■□□□□ 0.94
PCDHB11Q9Y5F2 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHB11Q9Y5F2 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
PCDHB11Q9Y5F2 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHB11Q9Y5F2 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHB11Q9Y5F2 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.9■□□□□ 0.94
PCDHB11Q9Y5F2 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHB11Q9Y5F2 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHB11Q9Y5F2 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHB11Q9Y5F2 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHB11Q9Y5F2 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHB11Q9Y5F2 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHB11Q9Y5F2 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.9■□□□□ 0.94
PCDHB11Q9Y5F2 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms