Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LSM4Q9Y4Z0 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC17.07■□□□□ 0.32
LSM4Q9Y4Z0 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC17.07■□□□□ 0.32
LSM4Q9Y4Z0 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
LSM4Q9Y4Z0 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
LSM4Q9Y4Z0 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC17.07■□□□□ 0.32
LSM4Q9Y4Z0 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LSM4Q9Y4Z0 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC17.07■□□□□ 0.32
LSM4Q9Y4Z0 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC17.07■□□□□ 0.32
LSM4Q9Y4Z0 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LSM4Q9Y4Z0 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC17.07■□□□□ 0.32
LSM4Q9Y4Z0 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC17.07■□□□□ 0.32
LSM4Q9Y4Z0 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC17.07■□□□□ 0.32
LSM4Q9Y4Z0 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LSM4Q9Y4Z0 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC17.07■□□□□ 0.32
LSM4Q9Y4Z0 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
LSM4Q9Y4Z0 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LSM4Q9Y4Z0 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LSM4Q9Y4Z0 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
LSM4Q9Y4Z0 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LSM4Q9Y4Z0 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
LSM4Q9Y4Z0 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LSM4Q9Y4Z0 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
LSM4Q9Y4Z0 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC17.06■□□□□ 0.32
LSM4Q9Y4Z0 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC17.06■□□□□ 0.32
LSM4Q9Y4Z0 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LSM4Q9Y4Z0 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC17.06■□□□□ 0.32
LSM4Q9Y4Z0 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC17.06■□□□□ 0.32
LSM4Q9Y4Z0 ME2-206ENST00000638410 2289 ntTSL 5 BASIC17.06■□□□□ 0.32
LSM4Q9Y4Z0 ME2-210ENST00000639255 2262 ntTSL 5 BASIC17.06■□□□□ 0.32
LSM4Q9Y4Z0 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC17.06■□□□□ 0.32
LSM4Q9Y4Z0 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LSM4Q9Y4Z0 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC17.06■□□□□ 0.32
LSM4Q9Y4Z0 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LSM4Q9Y4Z0 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LSM4Q9Y4Z0 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LSM4Q9Y4Z0 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LSM4Q9Y4Z0 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LSM4Q9Y4Z0 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
LSM4Q9Y4Z0 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LSM4Q9Y4Z0 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LSM4Q9Y4Z0 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
LSM4Q9Y4Z0 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC17.05■□□□□ 0.32
LSM4Q9Y4Z0 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
LSM4Q9Y4Z0 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LSM4Q9Y4Z0 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
LSM4Q9Y4Z0 STOX2-205ENST00000513034 807 ntTSL 3 BASIC17.05■□□□□ 0.32
LSM4Q9Y4Z0 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LSM4Q9Y4Z0 MIR4767-201ENST00000582827 78 ntBASIC17.05■□□□□ 0.32
LSM4Q9Y4Z0 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
LSM4Q9Y4Z0 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
LSM4Q9Y4Z0 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC17.05■□□□□ 0.32
LSM4Q9Y4Z0 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LSM4Q9Y4Z0 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
LSM4Q9Y4Z0 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
LSM4Q9Y4Z0 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC17.05■□□□□ 0.32
LSM4Q9Y4Z0 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
LSM4Q9Y4Z0 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LSM4Q9Y4Z0 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC17.04■□□□□ 0.32
LSM4Q9Y4Z0 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LSM4Q9Y4Z0 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LSM4Q9Y4Z0 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
LSM4Q9Y4Z0 FEM1AP4-201ENST00000443167 1987 ntBASIC17.04■□□□□ 0.32
LSM4Q9Y4Z0 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LSM4Q9Y4Z0 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LSM4Q9Y4Z0 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
LSM4Q9Y4Z0 PTMA-205ENST00000410064 814 ntTSL 2 BASIC17.04■□□□□ 0.32
LSM4Q9Y4Z0 AC097381.1-201ENST00000429019 1296 ntBASIC17.04■□□□□ 0.32
LSM4Q9Y4Z0 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC17.04■□□□□ 0.32
LSM4Q9Y4Z0 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
LSM4Q9Y4Z0 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LSM4Q9Y4Z0 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LSM4Q9Y4Z0 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LSM4Q9Y4Z0 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC17.03■□□□□ 0.32
LSM4Q9Y4Z0 RASA4CP-201ENST00000424092 1398 ntBASIC17.03■□□□□ 0.32
LSM4Q9Y4Z0 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
LSM4Q9Y4Z0 AC073130.3-201ENST00000624389 2278 ntBASIC17.03■□□□□ 0.32
LSM4Q9Y4Z0 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LSM4Q9Y4Z0 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC17.03■□□□□ 0.32
LSM4Q9Y4Z0 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LSM4Q9Y4Z0 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
LSM4Q9Y4Z0 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC17.03■□□□□ 0.32
LSM4Q9Y4Z0 ANKRD20A6P-201ENST00000618763 204 ntBASIC17.03■□□□□ 0.32
LSM4Q9Y4Z0 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LSM4Q9Y4Z0 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
LSM4Q9Y4Z0 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LSM4Q9Y4Z0 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LSM4Q9Y4Z0 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LSM4Q9Y4Z0 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LSM4Q9Y4Z0 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LSM4Q9Y4Z0 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.03■□□□□ 0.32
LSM4Q9Y4Z0 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LSM4Q9Y4Z0 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC17.03■□□□□ 0.32
LSM4Q9Y4Z0 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
LSM4Q9Y4Z0 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC17.02■□□□□ 0.32
LSM4Q9Y4Z0 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LSM4Q9Y4Z0 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
LSM4Q9Y4Z0 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC17.02■□□□□ 0.32
LSM4Q9Y4Z0 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
LSM4Q9Y4Z0 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms