Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 SRD5A1P1-201ENST00000442297 786 ntBASIC21.74■■□□□ 1.07
CHMP2BQ9UQN3 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.74■■□□□ 1.07
CHMP2BQ9UQN3 AC068587.7-201ENST00000641602 218 ntBASIC21.74■■□□□ 1.07
CHMP2BQ9UQN3 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHMP2BQ9UQN3 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.74■■□□□ 1.07
CHMP2BQ9UQN3 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CHMP2BQ9UQN3 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CHMP2BQ9UQN3 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
CHMP2BQ9UQN3 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CHMP2BQ9UQN3 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHMP2BQ9UQN3 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.73■■□□□ 1.07
CHMP2BQ9UQN3 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHMP2BQ9UQN3 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.73■■□□□ 1.07
CHMP2BQ9UQN3 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.73■■□□□ 1.07
CHMP2BQ9UQN3 AL512631.2-201ENST00000604634 923 ntBASIC21.73■■□□□ 1.07
CHMP2BQ9UQN3 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.73■■□□□ 1.07
CHMP2BQ9UQN3 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHMP2BQ9UQN3 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CHMP2BQ9UQN3 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHMP2BQ9UQN3 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.73■■□□□ 1.07
CHMP2BQ9UQN3 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.73■■□□□ 1.07
CHMP2BQ9UQN3 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHMP2BQ9UQN3 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHMP2BQ9UQN3 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CHMP2BQ9UQN3 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CHMP2BQ9UQN3 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.72■■□□□ 1.07
CHMP2BQ9UQN3 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
CHMP2BQ9UQN3 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.72■■□□□ 1.07
CHMP2BQ9UQN3 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
CHMP2BQ9UQN3 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.72■■□□□ 1.07
CHMP2BQ9UQN3 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CHMP2BQ9UQN3 AC087239.1-201ENST00000622671 572 ntBASIC21.72■■□□□ 1.07
CHMP2BQ9UQN3 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CHMP2BQ9UQN3 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
CHMP2BQ9UQN3 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CHMP2BQ9UQN3 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
CHMP2BQ9UQN3 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CHMP2BQ9UQN3 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
CHMP2BQ9UQN3 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CHMP2BQ9UQN3 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CHMP2BQ9UQN3 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CHMP2BQ9UQN3 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CHMP2BQ9UQN3 AC104564.3-201ENST00000582367 638 ntBASIC21.71■■□□□ 1.07
CHMP2BQ9UQN3 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
CHMP2BQ9UQN3 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
CHMP2BQ9UQN3 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CHMP2BQ9UQN3 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.71■■□□□ 1.07
CHMP2BQ9UQN3 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.71■■□□□ 1.07
CHMP2BQ9UQN3 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CHMP2BQ9UQN3 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CHMP2BQ9UQN3 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CHMP2BQ9UQN3 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.7■■□□□ 1.06
CHMP2BQ9UQN3 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CHMP2BQ9UQN3 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CHMP2BQ9UQN3 AC010141.3-201ENST00000456659 717 ntBASIC21.7■■□□□ 1.06
CHMP2BQ9UQN3 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.7■■□□□ 1.06
CHMP2BQ9UQN3 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.7■■□□□ 1.06
CHMP2BQ9UQN3 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CHMP2BQ9UQN3 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CHMP2BQ9UQN3 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.06
CHMP2BQ9UQN3 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
CHMP2BQ9UQN3 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.7■■□□□ 1.06
CHMP2BQ9UQN3 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CHMP2BQ9UQN3 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CHMP2BQ9UQN3 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.7■■□□□ 1.06
CHMP2BQ9UQN3 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CHMP2BQ9UQN3 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.69■■□□□ 1.06
CHMP2BQ9UQN3 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
CHMP2BQ9UQN3 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
CHMP2BQ9UQN3 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CHMP2BQ9UQN3 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CHMP2BQ9UQN3 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.69■■□□□ 1.06
CHMP2BQ9UQN3 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CHMP2BQ9UQN3 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.69■■□□□ 1.06
CHMP2BQ9UQN3 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CHMP2BQ9UQN3 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.69■■□□□ 1.06
CHMP2BQ9UQN3 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
CHMP2BQ9UQN3 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.69■■□□□ 1.06
CHMP2BQ9UQN3 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.69■■□□□ 1.06
CHMP2BQ9UQN3 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.69■■□□□ 1.06
CHMP2BQ9UQN3 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CHMP2BQ9UQN3 AC092171.4-201ENST00000609130 632 ntBASIC21.68■■□□□ 1.06
CHMP2BQ9UQN3 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
CHMP2BQ9UQN3 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.68■■□□□ 1.06
CHMP2BQ9UQN3 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.68■■□□□ 1.06
CHMP2BQ9UQN3 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CHMP2BQ9UQN3 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CHMP2BQ9UQN3 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CHMP2BQ9UQN3 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CHMP2BQ9UQN3 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CHMP2BQ9UQN3 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
CHMP2BQ9UQN3 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CHMP2BQ9UQN3 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CHMP2BQ9UQN3 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CHMP2BQ9UQN3 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.67■■□□□ 1.06
CHMP2BQ9UQN3 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.67■■□□□ 1.06
CHMP2BQ9UQN3 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.67■■□□□ 1.06
CHMP2BQ9UQN3 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
CHMP2BQ9UQN3 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.67■■□□□ 1.06
CHMP2BQ9UQN3 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms