Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
MACF1Q9UPN3 AL358472.4-201ENST00000633140 710 ntBASIC9□□□□□ -0.97
MACF1Q9UPN3 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC9□□□□□ -0.97
MACF1Q9UPN3 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
MACF1Q9UPN3 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
MACF1Q9UPN3 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC9□□□□□ -0.97
MACF1Q9UPN3 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC9□□□□□ -0.97
MACF1Q9UPN3 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC9□□□□□ -0.97
MACF1Q9UPN3 AP001160.3-201ENST00000601484 763 ntBASIC9□□□□□ -0.97
MACF1Q9UPN3 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC9□□□□□ -0.97
MACF1Q9UPN3 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC9□□□□□ -0.97
MACF1Q9UPN3 AC142472.1-201ENST00000612013 1741 ntBASIC9□□□□□ -0.97
MACF1Q9UPN3 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC9□□□□□ -0.97
MACF1Q9UPN3 AL137013.1-201ENST00000432946 1228 ntBASIC9□□□□□ -0.97
MACF1Q9UPN3 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC9□□□□□ -0.97
MACF1Q9UPN3 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
MACF1Q9UPN3 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC9□□□□□ -0.97
MACF1Q9UPN3 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC9□□□□□ -0.97
MACF1Q9UPN3 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
MACF1Q9UPN3 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC8.99□□□□□ -0.97
MACF1Q9UPN3 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
MACF1Q9UPN3 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC8.99□□□□□ -0.97
MACF1Q9UPN3 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
MACF1Q9UPN3 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC8.99□□□□□ -0.97
MACF1Q9UPN3 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
MACF1Q9UPN3 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
MACF1Q9UPN3 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
MACF1Q9UPN3 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC8.99□□□□□ -0.97
MACF1Q9UPN3 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
MACF1Q9UPN3 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC8.99□□□□□ -0.97
MACF1Q9UPN3 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
MACF1Q9UPN3 TK2-204ENST00000525974 1178 ntTSL 2 BASIC8.99□□□□□ -0.97
MACF1Q9UPN3 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC8.99□□□□□ -0.97
MACF1Q9UPN3 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC8.99□□□□□ -0.97
MACF1Q9UPN3 SERP1-208ENST00000491660 830 ntTSL 2 BASIC8.99□□□□□ -0.97
MACF1Q9UPN3 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC8.99□□□□□ -0.97
MACF1Q9UPN3 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
MACF1Q9UPN3 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
MACF1Q9UPN3 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC8.98□□□□□ -0.97
MACF1Q9UPN3 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
MACF1Q9UPN3 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
MACF1Q9UPN3 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC8.98□□□□□ -0.97
MACF1Q9UPN3 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
MACF1Q9UPN3 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
MACF1Q9UPN3 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC8.98□□□□□ -0.97
MACF1Q9UPN3 AC006011.2-201ENST00000621313 1158 ntBASIC8.98□□□□□ -0.97
MACF1Q9UPN3 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
MACF1Q9UPN3 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
MACF1Q9UPN3 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
MACF1Q9UPN3 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
MACF1Q9UPN3 LSM12P1-201ENST00000411836 588 ntBASIC8.98□□□□□ -0.97
MACF1Q9UPN3 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC8.98□□□□□ -0.97
MACF1Q9UPN3 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC8.98□□□□□ -0.97
MACF1Q9UPN3 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC8.98□□□□□ -0.97
MACF1Q9UPN3 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
MACF1Q9UPN3 AC113410.3-201ENST00000623366 203 ntBASIC8.98□□□□□ -0.97
MACF1Q9UPN3 AC010980.2-201ENST00000587099 1412 ntBASIC8.98□□□□□ -0.97
MACF1Q9UPN3 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC8.98□□□□□ -0.97
MACF1Q9UPN3 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC8.98□□□□□ -0.97
MACF1Q9UPN3 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
MACF1Q9UPN3 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC8.98□□□□□ -0.97
MACF1Q9UPN3 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
MACF1Q9UPN3 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC8.98□□□□□ -0.97
MACF1Q9UPN3 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
MACF1Q9UPN3 FDX1P1-201ENST00000449115 551 ntBASIC8.98□□□□□ -0.97
MACF1Q9UPN3 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC8.98□□□□□ -0.97
MACF1Q9UPN3 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC8.98□□□□□ -0.97
MACF1Q9UPN3 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
MACF1Q9UPN3 KRT18P22-201ENST00000402024 1347 ntBASIC8.98□□□□□ -0.97
MACF1Q9UPN3 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC8.98□□□□□ -0.97
MACF1Q9UPN3 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
MACF1Q9UPN3 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
MACF1Q9UPN3 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
MACF1Q9UPN3 CLEC4GP1-201ENST00000596555 870 ntBASIC8.97□□□□□ -0.97
MACF1Q9UPN3 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC8.97□□□□□ -0.97
MACF1Q9UPN3 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
MACF1Q9UPN3 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
MACF1Q9UPN3 PP7080-204ENST00000510714 601 ntTSL 3 BASIC8.97□□□□□ -0.97
MACF1Q9UPN3 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC8.97□□□□□ -0.97
MACF1Q9UPN3 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
MACF1Q9UPN3 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
MACF1Q9UPN3 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
MACF1Q9UPN3 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC8.97□□□□□ -0.97
MACF1Q9UPN3 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
MACF1Q9UPN3 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC8.97□□□□□ -0.97
MACF1Q9UPN3 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC8.97□□□□□ -0.97
MACF1Q9UPN3 AC073508.3-201ENST00000619697 1419 ntBASIC8.97□□□□□ -0.97
MACF1Q9UPN3 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC8.97□□□□□ -0.97
MACF1Q9UPN3 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC8.97□□□□□ -0.97
MACF1Q9UPN3 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC8.97□□□□□ -0.97
MACF1Q9UPN3 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC8.97□□□□□ -0.97
MACF1Q9UPN3 AC091076.1-201ENST00000610741 619 ntBASIC8.97□□□□□ -0.97
MACF1Q9UPN3 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
MACF1Q9UPN3 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
MACF1Q9UPN3 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
MACF1Q9UPN3 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
MACF1Q9UPN3 GUK1-204ENST00000366721 689 ntTSL 3 BASIC8.97□□□□□ -0.97
MACF1Q9UPN3 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC8.97□□□□□ -0.97
MACF1Q9UPN3 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC8.97□□□□□ -0.97
MACF1Q9UPN3 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC8.97□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms