Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
COPS3Q9UNS2 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
COPS3Q9UNS2 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COPS3Q9UNS2 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COPS3Q9UNS2 KRT16P3-201ENST00000439127 1283 ntBASIC19.03■□□□□ 0.64
COPS3Q9UNS2 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COPS3Q9UNS2 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COPS3Q9UNS2 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COPS3Q9UNS2 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
COPS3Q9UNS2 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COPS3Q9UNS2 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.03■□□□□ 0.64
COPS3Q9UNS2 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
COPS3Q9UNS2 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.03■□□□□ 0.64
COPS3Q9UNS2 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.03■□□□□ 0.64
COPS3Q9UNS2 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.03■□□□□ 0.64
COPS3Q9UNS2 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COPS3Q9UNS2 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
COPS3Q9UNS2 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
COPS3Q9UNS2 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.02■□□□□ 0.64
COPS3Q9UNS2 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
COPS3Q9UNS2 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.02■□□□□ 0.64
COPS3Q9UNS2 OR7E47P-201ENST00000546390 1422 ntBASIC19.02■□□□□ 0.64
COPS3Q9UNS2 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
COPS3Q9UNS2 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
COPS3Q9UNS2 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
COPS3Q9UNS2 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
COPS3Q9UNS2 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.02■□□□□ 0.64
COPS3Q9UNS2 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
COPS3Q9UNS2 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
COPS3Q9UNS2 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.02■□□□□ 0.64
COPS3Q9UNS2 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
COPS3Q9UNS2 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
COPS3Q9UNS2 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
COPS3Q9UNS2 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.01■□□□□ 0.63
COPS3Q9UNS2 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
COPS3Q9UNS2 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
COPS3Q9UNS2 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.01■□□□□ 0.63
COPS3Q9UNS2 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
COPS3Q9UNS2 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
COPS3Q9UNS2 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
COPS3Q9UNS2 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.01■□□□□ 0.63
COPS3Q9UNS2 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
COPS3Q9UNS2 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.01■□□□□ 0.63
COPS3Q9UNS2 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
COPS3Q9UNS2 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.01■□□□□ 0.63
COPS3Q9UNS2 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
COPS3Q9UNS2 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
COPS3Q9UNS2 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.01■□□□□ 0.63
COPS3Q9UNS2 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
COPS3Q9UNS2 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.01■□□□□ 0.63
COPS3Q9UNS2 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.01■□□□□ 0.63
COPS3Q9UNS2 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
COPS3Q9UNS2 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
COPS3Q9UNS2 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
COPS3Q9UNS2 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19■□□□□ 0.63
COPS3Q9UNS2 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19■□□□□ 0.63
COPS3Q9UNS2 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
COPS3Q9UNS2 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COPS3Q9UNS2 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COPS3Q9UNS2 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19■□□□□ 0.63
COPS3Q9UNS2 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19■□□□□ 0.63
COPS3Q9UNS2 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
COPS3Q9UNS2 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
COPS3Q9UNS2 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
COPS3Q9UNS2 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19■□□□□ 0.63
COPS3Q9UNS2 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
COPS3Q9UNS2 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
COPS3Q9UNS2 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.99■□□□□ 0.63
COPS3Q9UNS2 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.99■□□□□ 0.63
COPS3Q9UNS2 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
COPS3Q9UNS2 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC18.99■□□□□ 0.63
COPS3Q9UNS2 MIR3181-201ENST00000578512 73 ntBASIC18.99■□□□□ 0.63
COPS3Q9UNS2 RASSF1-AS1-201ENST00000629828 790 ntBASIC18.99■□□□□ 0.63
COPS3Q9UNS2 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18.99■□□□□ 0.63
COPS3Q9UNS2 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.99■□□□□ 0.63
COPS3Q9UNS2 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.99■□□□□ 0.63
COPS3Q9UNS2 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
COPS3Q9UNS2 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COPS3Q9UNS2 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
COPS3Q9UNS2 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.98■□□□□ 0.63
COPS3Q9UNS2 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COPS3Q9UNS2 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
COPS3Q9UNS2 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
COPS3Q9UNS2 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COPS3Q9UNS2 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COPS3Q9UNS2 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COPS3Q9UNS2 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.98■□□□□ 0.63
COPS3Q9UNS2 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
COPS3Q9UNS2 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.98■□□□□ 0.63
COPS3Q9UNS2 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC18.98■□□□□ 0.63
COPS3Q9UNS2 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COPS3Q9UNS2 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
COPS3Q9UNS2 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.98■□□□□ 0.63
COPS3Q9UNS2 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
COPS3Q9UNS2 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.98■□□□□ 0.63
COPS3Q9UNS2 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
COPS3Q9UNS2 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COPS3Q9UNS2 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
COPS3Q9UNS2 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.97■□□□□ 0.63
COPS3Q9UNS2 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms