Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHGB4Q9UN71 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.65■□□□□ 0.9
PCDHGB4Q9UN71 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.65■□□□□ 0.9
PCDHGB4Q9UN71 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.65■□□□□ 0.9
PCDHGB4Q9UN71 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHGB4Q9UN71 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHGB4Q9UN71 AL499627.2-201ENST00000606283 725 ntBASIC20.65■□□□□ 0.9
PCDHGB4Q9UN71 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
PCDHGB4Q9UN71 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
PCDHGB4Q9UN71 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.65■□□□□ 0.9
PCDHGB4Q9UN71 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.65■□□□□ 0.9
PCDHGB4Q9UN71 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHGB4Q9UN71 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.65■□□□□ 0.9
PCDHGB4Q9UN71 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PCDHGB4Q9UN71 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PCDHGB4Q9UN71 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHGB4Q9UN71 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.64■□□□□ 0.89
PCDHGB4Q9UN71 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHGB4Q9UN71 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.64■□□□□ 0.89
PCDHGB4Q9UN71 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.64■□□□□ 0.89
PCDHGB4Q9UN71 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHGB4Q9UN71 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHGB4Q9UN71 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHGB4Q9UN71 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGB4Q9UN71 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGB4Q9UN71 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.63■□□□□ 0.89
PCDHGB4Q9UN71 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.63■□□□□ 0.89
PCDHGB4Q9UN71 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGB4Q9UN71 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
PCDHGB4Q9UN71 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.63■□□□□ 0.89
PCDHGB4Q9UN71 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGB4Q9UN71 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGB4Q9UN71 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.63■□□□□ 0.89
PCDHGB4Q9UN71 AL356740.2-201ENST00000601559 647 ntBASIC20.63■□□□□ 0.89
PCDHGB4Q9UN71 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.63■□□□□ 0.89
PCDHGB4Q9UN71 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGB4Q9UN71 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGB4Q9UN71 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGB4Q9UN71 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
PCDHGB4Q9UN71 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.63■□□□□ 0.89
PCDHGB4Q9UN71 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGB4Q9UN71 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHGB4Q9UN71 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
PCDHGB4Q9UN71 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHGB4Q9UN71 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.62■□□□□ 0.89
PCDHGB4Q9UN71 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHGB4Q9UN71 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.62■□□□□ 0.89
PCDHGB4Q9UN71 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
PCDHGB4Q9UN71 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.62■□□□□ 0.89
PCDHGB4Q9UN71 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHGB4Q9UN71 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGB4Q9UN71 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
PCDHGB4Q9UN71 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.61■□□□□ 0.89
PCDHGB4Q9UN71 CA15P2-201ENST00000611168 834 ntBASIC20.61■□□□□ 0.89
PCDHGB4Q9UN71 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.61■□□□□ 0.89
PCDHGB4Q9UN71 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
PCDHGB4Q9UN71 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
PCDHGB4Q9UN71 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
PCDHGB4Q9UN71 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGB4Q9UN71 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGB4Q9UN71 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGB4Q9UN71 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.61■□□□□ 0.89
PCDHGB4Q9UN71 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGB4Q9UN71 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGB4Q9UN71 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGB4Q9UN71 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.6■□□□□ 0.89
PCDHGB4Q9UN71 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
PCDHGB4Q9UN71 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGB4Q9UN71 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGB4Q9UN71 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGB4Q9UN71 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGB4Q9UN71 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGB4Q9UN71 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGB4Q9UN71 AL035685.1-201ENST00000636663 812 ntBASIC20.6■□□□□ 0.89
PCDHGB4Q9UN71 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGB4Q9UN71 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGB4Q9UN71 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHGB4Q9UN71 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHGB4Q9UN71 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
PCDHGB4Q9UN71 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.59■□□□□ 0.89
PCDHGB4Q9UN71 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
PCDHGB4Q9UN71 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHGB4Q9UN71 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHGB4Q9UN71 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHGB4Q9UN71 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
PCDHGB4Q9UN71 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHGB4Q9UN71 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.59■□□□□ 0.89
PCDHGB4Q9UN71 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.59■□□□□ 0.89
PCDHGB4Q9UN71 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.59■□□□□ 0.89
PCDHGB4Q9UN71 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.59■□□□□ 0.89
PCDHGB4Q9UN71 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
PCDHGB4Q9UN71 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHGB4Q9UN71 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHGB4Q9UN71 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHGB4Q9UN71 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHGB4Q9UN71 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHGB4Q9UN71 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHGB4Q9UN71 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHGB4Q9UN71 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.58■□□□□ 0.89
PCDHGB4Q9UN71 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms