Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
THUMPD1Q9NXG2 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
THUMPD1Q9NXG2 SYT6-210ENST00000641643 1587 ntBASIC20.09■□□□□ 0.81
THUMPD1Q9NXG2 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
THUMPD1Q9NXG2 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
THUMPD1Q9NXG2 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
THUMPD1Q9NXG2 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.09■□□□□ 0.81
THUMPD1Q9NXG2 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
THUMPD1Q9NXG2 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.09■□□□□ 0.81
THUMPD1Q9NXG2 AL034346.1-201ENST00000568244 1277 ntBASIC20.09■□□□□ 0.81
THUMPD1Q9NXG2 AC104564.3-201ENST00000582367 638 ntBASIC20.09■□□□□ 0.81
THUMPD1Q9NXG2 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
THUMPD1Q9NXG2 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
THUMPD1Q9NXG2 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
THUMPD1Q9NXG2 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.08■□□□□ 0.81
THUMPD1Q9NXG2 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
THUMPD1Q9NXG2 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
THUMPD1Q9NXG2 OXCT2P1-201ENST00000447263 1535 ntBASIC20.08■□□□□ 0.81
THUMPD1Q9NXG2 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
THUMPD1Q9NXG2 AL356441.2-201ENST00000443009 864 ntBASIC20.08■□□□□ 0.81
THUMPD1Q9NXG2 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.08■□□□□ 0.81
THUMPD1Q9NXG2 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.08■□□□□ 0.81
THUMPD1Q9NXG2 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
THUMPD1Q9NXG2 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.08■□□□□ 0.8
THUMPD1Q9NXG2 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.08■□□□□ 0.8
THUMPD1Q9NXG2 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
THUMPD1Q9NXG2 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
THUMPD1Q9NXG2 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.07■□□□□ 0.8
THUMPD1Q9NXG2 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
THUMPD1Q9NXG2 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.07■□□□□ 0.8
THUMPD1Q9NXG2 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.07■□□□□ 0.8
THUMPD1Q9NXG2 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
THUMPD1Q9NXG2 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
THUMPD1Q9NXG2 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
THUMPD1Q9NXG2 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.07■□□□□ 0.8
THUMPD1Q9NXG2 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.07■□□□□ 0.8
THUMPD1Q9NXG2 AC011298.3-201ENST00000615796 283 ntBASIC20.07■□□□□ 0.8
THUMPD1Q9NXG2 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
THUMPD1Q9NXG2 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
THUMPD1Q9NXG2 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
THUMPD1Q9NXG2 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
THUMPD1Q9NXG2 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.07■□□□□ 0.8
THUMPD1Q9NXG2 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
THUMPD1Q9NXG2 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
THUMPD1Q9NXG2 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
THUMPD1Q9NXG2 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
THUMPD1Q9NXG2 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
THUMPD1Q9NXG2 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
THUMPD1Q9NXG2 AC136469.2-201ENST00000623944 1028 ntBASIC20.06■□□□□ 0.8
THUMPD1Q9NXG2 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.06■□□□□ 0.8
THUMPD1Q9NXG2 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
THUMPD1Q9NXG2 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
THUMPD1Q9NXG2 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
THUMPD1Q9NXG2 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
THUMPD1Q9NXG2 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
THUMPD1Q9NXG2 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
THUMPD1Q9NXG2 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
THUMPD1Q9NXG2 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
THUMPD1Q9NXG2 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
THUMPD1Q9NXG2 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.05■□□□□ 0.8
THUMPD1Q9NXG2 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
THUMPD1Q9NXG2 AP005435.1-201ENST00000529293 1178 ntBASIC20.05■□□□□ 0.8
THUMPD1Q9NXG2 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.05■□□□□ 0.8
THUMPD1Q9NXG2 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.05■□□□□ 0.8
THUMPD1Q9NXG2 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
THUMPD1Q9NXG2 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.05■□□□□ 0.8
THUMPD1Q9NXG2 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.05■□□□□ 0.8
THUMPD1Q9NXG2 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
THUMPD1Q9NXG2 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
THUMPD1Q9NXG2 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.05■□□□□ 0.8
THUMPD1Q9NXG2 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
THUMPD1Q9NXG2 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.05■□□□□ 0.8
THUMPD1Q9NXG2 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.05■□□□□ 0.8
THUMPD1Q9NXG2 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.05■□□□□ 0.8
THUMPD1Q9NXG2 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.04■□□□□ 0.8
THUMPD1Q9NXG2 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
THUMPD1Q9NXG2 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
THUMPD1Q9NXG2 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
THUMPD1Q9NXG2 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
THUMPD1Q9NXG2 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
THUMPD1Q9NXG2 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.04■□□□□ 0.8
THUMPD1Q9NXG2 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.04■□□□□ 0.8
THUMPD1Q9NXG2 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
THUMPD1Q9NXG2 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
THUMPD1Q9NXG2 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
THUMPD1Q9NXG2 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
THUMPD1Q9NXG2 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
THUMPD1Q9NXG2 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
THUMPD1Q9NXG2 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
THUMPD1Q9NXG2 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
THUMPD1Q9NXG2 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
THUMPD1Q9NXG2 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.03■□□□□ 0.8
THUMPD1Q9NXG2 Z98882.1-201ENST00000622160 2253 ntBASIC20.03■□□□□ 0.8
THUMPD1Q9NXG2 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
THUMPD1Q9NXG2 SERBP1P1-201ENST00000396021 1160 ntBASIC20.03■□□□□ 0.8
THUMPD1Q9NXG2 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.03■□□□□ 0.8
THUMPD1Q9NXG2 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
THUMPD1Q9NXG2 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.03■□□□□ 0.8
THUMPD1Q9NXG2 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.03■□□□□ 0.8
THUMPD1Q9NXG2 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms