Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC17.73■□□□□ 0.43
LIN7CQ9NUP9 AL138724.1-201ENST00000606771 1088 ntBASIC17.73■□□□□ 0.43
LIN7CQ9NUP9 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LIN7CQ9NUP9 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LIN7CQ9NUP9 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LIN7CQ9NUP9 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
LIN7CQ9NUP9 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LIN7CQ9NUP9 TUB-203ENST00000534099 1759 ntTSL 2 BASIC17.72■□□□□ 0.43
LIN7CQ9NUP9 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LIN7CQ9NUP9 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
LIN7CQ9NUP9 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LIN7CQ9NUP9 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LIN7CQ9NUP9 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LIN7CQ9NUP9 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LIN7CQ9NUP9 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
LIN7CQ9NUP9 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
LIN7CQ9NUP9 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
LIN7CQ9NUP9 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC17.71■□□□□ 0.43
LIN7CQ9NUP9 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LIN7CQ9NUP9 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LIN7CQ9NUP9 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC17.71■□□□□ 0.43
LIN7CQ9NUP9 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LIN7CQ9NUP9 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LIN7CQ9NUP9 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LIN7CQ9NUP9 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC17.71■□□□□ 0.43
LIN7CQ9NUP9 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LIN7CQ9NUP9 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC17.71■□□□□ 0.43
LIN7CQ9NUP9 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC17.71■□□□□ 0.43
LIN7CQ9NUP9 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
LIN7CQ9NUP9 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LIN7CQ9NUP9 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC17.71■□□□□ 0.43
LIN7CQ9NUP9 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
LIN7CQ9NUP9 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC17.71■□□□□ 0.42
LIN7CQ9NUP9 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
LIN7CQ9NUP9 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
LIN7CQ9NUP9 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LIN7CQ9NUP9 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LIN7CQ9NUP9 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LIN7CQ9NUP9 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LIN7CQ9NUP9 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LIN7CQ9NUP9 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LIN7CQ9NUP9 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
LIN7CQ9NUP9 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
LIN7CQ9NUP9 PTCHD3P2-201ENST00000424937 1205 ntBASIC17.7■□□□□ 0.42
LIN7CQ9NUP9 AC006455.2-201ENST00000429931 906 ntBASIC17.7■□□□□ 0.42
LIN7CQ9NUP9 AL499627.2-201ENST00000606283 725 ntBASIC17.7■□□□□ 0.42
LIN7CQ9NUP9 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.7■□□□□ 0.42
LIN7CQ9NUP9 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
LIN7CQ9NUP9 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LIN7CQ9NUP9 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC17.7■□□□□ 0.42
LIN7CQ9NUP9 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
LIN7CQ9NUP9 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LIN7CQ9NUP9 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LIN7CQ9NUP9 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LIN7CQ9NUP9 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
LIN7CQ9NUP9 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LIN7CQ9NUP9 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
LIN7CQ9NUP9 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LIN7CQ9NUP9 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LIN7CQ9NUP9 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
LIN7CQ9NUP9 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LIN7CQ9NUP9 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC17.69■□□□□ 0.42
LIN7CQ9NUP9 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LIN7CQ9NUP9 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC17.69■□□□□ 0.42
LIN7CQ9NUP9 AC096631.2-201ENST00000436136 790 ntBASIC17.69■□□□□ 0.42
LIN7CQ9NUP9 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC17.69■□□□□ 0.42
LIN7CQ9NUP9 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC17.69■□□□□ 0.42
LIN7CQ9NUP9 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
LIN7CQ9NUP9 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
LIN7CQ9NUP9 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
LIN7CQ9NUP9 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LIN7CQ9NUP9 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
LIN7CQ9NUP9 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LIN7CQ9NUP9 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC17.69■□□□□ 0.42
LIN7CQ9NUP9 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LIN7CQ9NUP9 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
LIN7CQ9NUP9 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
LIN7CQ9NUP9 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
LIN7CQ9NUP9 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LIN7CQ9NUP9 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
LIN7CQ9NUP9 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC17.68■□□□□ 0.42
LIN7CQ9NUP9 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LIN7CQ9NUP9 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
LIN7CQ9NUP9 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC17.68■□□□□ 0.42
LIN7CQ9NUP9 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LIN7CQ9NUP9 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
LIN7CQ9NUP9 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LIN7CQ9NUP9 UNC93B3-201ENST00000308076 687 ntBASIC17.68■□□□□ 0.42
LIN7CQ9NUP9 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
LIN7CQ9NUP9 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
LIN7CQ9NUP9 SERBP1P1-201ENST00000396021 1160 ntBASIC17.68■□□□□ 0.42
LIN7CQ9NUP9 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC17.68■□□□□ 0.42
LIN7CQ9NUP9 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC17.68■□□□□ 0.42
LIN7CQ9NUP9 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LIN7CQ9NUP9 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC17.68■□□□□ 0.42
LIN7CQ9NUP9 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LIN7CQ9NUP9 pRNA.6-201ENST00000610482 90 ntBASIC17.68■□□□□ 0.42
LIN7CQ9NUP9 pRNA.5-201ENST00000612139 90 ntBASIC17.68■□□□□ 0.42
LIN7CQ9NUP9 AC011298.3-201ENST00000615796 283 ntBASIC17.68■□□□□ 0.42
LIN7CQ9NUP9 pRNA.11-201ENST00000618423 90 ntBASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms