Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 SP2-202ENST00000613139 908 ntTSL 5 BASIC22.89■■□□□ 1.25
CISHQ9NSE2 LINC00565-201ENST00000562710 2331 ntBASIC22.89■■□□□ 1.25
CISHQ9NSE2 AC005224.4-201ENST00000583262 1652 ntBASIC22.89■■□□□ 1.25
CISHQ9NSE2 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC22.89■■□□□ 1.25
CISHQ9NSE2 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CISHQ9NSE2 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC22.89■■□□□ 1.25
CISHQ9NSE2 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CISHQ9NSE2 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
CISHQ9NSE2 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
CISHQ9NSE2 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CISHQ9NSE2 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
CISHQ9NSE2 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CISHQ9NSE2 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC22.88■■□□□ 1.25
CISHQ9NSE2 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC22.88■■□□□ 1.25
CISHQ9NSE2 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
CISHQ9NSE2 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CISHQ9NSE2 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC22.88■■□□□ 1.25
CISHQ9NSE2 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
CISHQ9NSE2 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
CISHQ9NSE2 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
CISHQ9NSE2 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC22.87■■□□□ 1.25
CISHQ9NSE2 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
CISHQ9NSE2 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC22.87■■□□□ 1.25
CISHQ9NSE2 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC22.87■■□□□ 1.25
CISHQ9NSE2 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC22.87■■□□□ 1.25
CISHQ9NSE2 AC055733.4-201ENST00000638462 1354 ntBASIC22.87■■□□□ 1.25
CISHQ9NSE2 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CISHQ9NSE2 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC22.87■■□□□ 1.25
CISHQ9NSE2 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
CISHQ9NSE2 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CISHQ9NSE2 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC22.86■■□□□ 1.25
CISHQ9NSE2 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CISHQ9NSE2 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC22.86■■□□□ 1.25
CISHQ9NSE2 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC22.86■■□□□ 1.25
CISHQ9NSE2 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CISHQ9NSE2 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CISHQ9NSE2 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CISHQ9NSE2 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CISHQ9NSE2 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
CISHQ9NSE2 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CISHQ9NSE2 YBX1P1-201ENST00000445822 960 ntBASIC22.85■■□□□ 1.25
CISHQ9NSE2 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC22.85■■□□□ 1.25
CISHQ9NSE2 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC22.85■■□□□ 1.25
CISHQ9NSE2 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC22.85■■□□□ 1.25
CISHQ9NSE2 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
CISHQ9NSE2 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC22.85■■□□□ 1.25
CISHQ9NSE2 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC22.84■■□□□ 1.25
CISHQ9NSE2 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CISHQ9NSE2 AC010542.4-201ENST00000563151 1910 ntBASIC22.84■■□□□ 1.25
CISHQ9NSE2 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
CISHQ9NSE2 ME2-206ENST00000638410 2289 ntTSL 5 BASIC22.84■■□□□ 1.25
CISHQ9NSE2 ME2-210ENST00000639255 2262 ntTSL 5 BASIC22.84■■□□□ 1.25
CISHQ9NSE2 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC22.84■■□□□ 1.25
CISHQ9NSE2 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
CISHQ9NSE2 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
CISHQ9NSE2 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC22.84■■□□□ 1.25
CISHQ9NSE2 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CISHQ9NSE2 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC22.84■■□□□ 1.25
CISHQ9NSE2 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
CISHQ9NSE2 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
CISHQ9NSE2 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CISHQ9NSE2 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC22.84■■□□□ 1.25
CISHQ9NSE2 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
CISHQ9NSE2 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
CISHQ9NSE2 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC22.84■■□□□ 1.25
CISHQ9NSE2 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CISHQ9NSE2 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
CISHQ9NSE2 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
CISHQ9NSE2 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC22.83■■□□□ 1.25
CISHQ9NSE2 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
CISHQ9NSE2 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
CISHQ9NSE2 AC123595.1-201ENST00000440769 1046 ntBASIC22.83■■□□□ 1.25
CISHQ9NSE2 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC22.83■■□□□ 1.25
CISHQ9NSE2 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC22.83■■□□□ 1.25
CISHQ9NSE2 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC22.83■■□□□ 1.25
CISHQ9NSE2 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
CISHQ9NSE2 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
CISHQ9NSE2 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC22.83■■□□□ 1.24
CISHQ9NSE2 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
CISHQ9NSE2 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC22.82■■□□□ 1.24
CISHQ9NSE2 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
CISHQ9NSE2 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC22.82■■□□□ 1.24
CISHQ9NSE2 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
CISHQ9NSE2 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
CISHQ9NSE2 AC003102.1-202ENST00000563394 1796 ntBASIC22.82■■□□□ 1.24
CISHQ9NSE2 LINC02228-203ENST00000641970 1355 ntBASIC22.82■■□□□ 1.24
CISHQ9NSE2 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CISHQ9NSE2 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC22.82■■□□□ 1.24
CISHQ9NSE2 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
CISHQ9NSE2 FBXW4P1-201ENST00000426721 2239 ntBASIC22.82■■□□□ 1.24
CISHQ9NSE2 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CISHQ9NSE2 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
CISHQ9NSE2 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC22.82■■□□□ 1.24
CISHQ9NSE2 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CISHQ9NSE2 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
CISHQ9NSE2 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
CISHQ9NSE2 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC22.81■■□□□ 1.24
CISHQ9NSE2 GOLGA2P6-201ENST00000340929 2049 ntBASIC22.81■■□□□ 1.24
CISHQ9NSE2 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC22.81■■□□□ 1.24
CISHQ9NSE2 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms