Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC25.46■■□□□ 1.67
DDX4Q9NQI0 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC25.46■■□□□ 1.67
DDX4Q9NQI0 AC083906.2-201ENST00000511578 360 ntBASIC25.46■■□□□ 1.67
DDX4Q9NQI0 SLC7A5P2-201ENST00000553010 536 ntBASIC25.46■■□□□ 1.67
DDX4Q9NQI0 AL121832.2-201ENST00000610979 668 ntBASIC25.46■■□□□ 1.67
DDX4Q9NQI0 PARP1-210ENST00000629232 477 ntTSL 5 BASIC25.46■■□□□ 1.67
DDX4Q9NQI0 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC25.46■■□□□ 1.67
DDX4Q9NQI0 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC25.46■■□□□ 1.67
DDX4Q9NQI0 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC25.46■■□□□ 1.67
DDX4Q9NQI0 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
DDX4Q9NQI0 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
DDX4Q9NQI0 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
DDX4Q9NQI0 AC139530.1-201ENST00000575312 1977 ntBASIC25.45■■□□□ 1.67
DDX4Q9NQI0 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC25.45■■□□□ 1.67
DDX4Q9NQI0 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
DDX4Q9NQI0 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC25.45■■□□□ 1.67
DDX4Q9NQI0 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC25.45■■□□□ 1.66
DDX4Q9NQI0 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.66
DDX4Q9NQI0 METTL15-202ENST00000403099 795 ntTSL 5 BASIC25.45■■□□□ 1.66
DDX4Q9NQI0 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC25.45■■□□□ 1.66
DDX4Q9NQI0 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC25.45■■□□□ 1.66
DDX4Q9NQI0 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC25.45■■□□□ 1.66
DDX4Q9NQI0 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
DDX4Q9NQI0 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
DDX4Q9NQI0 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
DDX4Q9NQI0 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC25.44■■□□□ 1.66
DDX4Q9NQI0 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
DDX4Q9NQI0 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC25.44■■□□□ 1.66
DDX4Q9NQI0 TSPY6P-201ENST00000448518 926 ntBASIC25.44■■□□□ 1.66
DDX4Q9NQI0 AC142086.2-201ENST00000569753 217 ntBASIC25.44■■□□□ 1.66
DDX4Q9NQI0 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC25.44■■□□□ 1.66
DDX4Q9NQI0 AC010536.3-201ENST00000620306 533 ntBASIC25.44■■□□□ 1.66
DDX4Q9NQI0 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
DDX4Q9NQI0 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
DDX4Q9NQI0 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
DDX4Q9NQI0 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC25.43■■□□□ 1.66
DDX4Q9NQI0 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
DDX4Q9NQI0 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
DDX4Q9NQI0 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
DDX4Q9NQI0 KRT18P20-201ENST00000548986 1279 ntBASIC25.43■■□□□ 1.66
DDX4Q9NQI0 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC25.43■■□□□ 1.66
DDX4Q9NQI0 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
DDX4Q9NQI0 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
DDX4Q9NQI0 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
DDX4Q9NQI0 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC25.43■■□□□ 1.66
DDX4Q9NQI0 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
DDX4Q9NQI0 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC25.43■■□□□ 1.66
DDX4Q9NQI0 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
DDX4Q9NQI0 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC25.42■■□□□ 1.66
DDX4Q9NQI0 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC25.42■■□□□ 1.66
DDX4Q9NQI0 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC25.42■■□□□ 1.66
DDX4Q9NQI0 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC25.42■■□□□ 1.66
DDX4Q9NQI0 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC25.42■■□□□ 1.66
DDX4Q9NQI0 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC25.42■■□□□ 1.66
DDX4Q9NQI0 AC053503.5-201ENST00000601508 636 ntBASIC25.42■■□□□ 1.66
DDX4Q9NQI0 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
DDX4Q9NQI0 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
DDX4Q9NQI0 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC25.42■■□□□ 1.66
DDX4Q9NQI0 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
DDX4Q9NQI0 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
DDX4Q9NQI0 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
DDX4Q9NQI0 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
DDX4Q9NQI0 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
DDX4Q9NQI0 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
DDX4Q9NQI0 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
DDX4Q9NQI0 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
DDX4Q9NQI0 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
DDX4Q9NQI0 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
DDX4Q9NQI0 APTR-203ENST00000430801 583 ntTSL 5 BASIC25.4■■□□□ 1.66
DDX4Q9NQI0 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC25.4■■□□□ 1.66
DDX4Q9NQI0 OAS3-207ENST00000551007 998 ntTSL 2 BASIC25.4■■□□□ 1.66
DDX4Q9NQI0 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC25.4■■□□□ 1.66
DDX4Q9NQI0 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
DDX4Q9NQI0 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC25.4■■□□□ 1.66
DDX4Q9NQI0 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC25.4■■□□□ 1.66
DDX4Q9NQI0 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
DDX4Q9NQI0 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
DDX4Q9NQI0 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC25.4■■□□□ 1.66
DDX4Q9NQI0 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC25.39■■□□□ 1.66
DDX4Q9NQI0 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
DDX4Q9NQI0 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC25.39■■□□□ 1.66
DDX4Q9NQI0 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
DDX4Q9NQI0 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
DDX4Q9NQI0 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.66
DDX4Q9NQI0 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
DDX4Q9NQI0 AL138781.1-201ENST00000566567 1274 ntBASIC25.39■■□□□ 1.66
DDX4Q9NQI0 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
DDX4Q9NQI0 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
DDX4Q9NQI0 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC25.39■■□□□ 1.65
DDX4Q9NQI0 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
DDX4Q9NQI0 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
DDX4Q9NQI0 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
DDX4Q9NQI0 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
DDX4Q9NQI0 LTK-203ENST00000453182 2412 ntTSL 2 BASIC25.38■■□□□ 1.65
DDX4Q9NQI0 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
DDX4Q9NQI0 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
DDX4Q9NQI0 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC25.38■■□□□ 1.65
DDX4Q9NQI0 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC25.38■■□□□ 1.65
DDX4Q9NQI0 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
DDX4Q9NQI0 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms