Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.33■□□□□ 0.85
SLC52A3Q9NQ40 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
SLC52A3Q9NQ40 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SLC52A3Q9NQ40 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SLC52A3Q9NQ40 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SLC52A3Q9NQ40 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
SLC52A3Q9NQ40 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.33■□□□□ 0.85
SLC52A3Q9NQ40 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
SLC52A3Q9NQ40 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.33■□□□□ 0.84
SLC52A3Q9NQ40 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
SLC52A3Q9NQ40 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC52A3Q9NQ40 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC52A3Q9NQ40 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SLC52A3Q9NQ40 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC52A3Q9NQ40 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.32■□□□□ 0.84
SLC52A3Q9NQ40 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.32■□□□□ 0.84
SLC52A3Q9NQ40 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC52A3Q9NQ40 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SLC52A3Q9NQ40 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.32■□□□□ 0.84
SLC52A3Q9NQ40 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SLC52A3Q9NQ40 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC52A3Q9NQ40 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC52A3Q9NQ40 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC52A3Q9NQ40 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.32■□□□□ 0.84
SLC52A3Q9NQ40 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC52A3Q9NQ40 AL049796.1-201ENST00000565336 1766 ntBASIC20.31■□□□□ 0.84
SLC52A3Q9NQ40 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC52A3Q9NQ40 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC52A3Q9NQ40 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC52A3Q9NQ40 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SLC52A3Q9NQ40 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
SLC52A3Q9NQ40 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.31■□□□□ 0.84
SLC52A3Q9NQ40 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC52A3Q9NQ40 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
SLC52A3Q9NQ40 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
SLC52A3Q9NQ40 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.31■□□□□ 0.84
SLC52A3Q9NQ40 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC52A3Q9NQ40 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC52A3Q9NQ40 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SLC52A3Q9NQ40 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC52A3Q9NQ40 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC52A3Q9NQ40 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.3■□□□□ 0.84
SLC52A3Q9NQ40 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
SLC52A3Q9NQ40 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC52A3Q9NQ40 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
SLC52A3Q9NQ40 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC52A3Q9NQ40 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
SLC52A3Q9NQ40 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.3■□□□□ 0.84
SLC52A3Q9NQ40 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.3■□□□□ 0.84
SLC52A3Q9NQ40 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
SLC52A3Q9NQ40 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.3■□□□□ 0.84
SLC52A3Q9NQ40 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.3■□□□□ 0.84
SLC52A3Q9NQ40 OXCT2P1-201ENST00000447263 1535 ntBASIC20.3■□□□□ 0.84
SLC52A3Q9NQ40 AC003102.1-202ENST00000563394 1796 ntBASIC20.3■□□□□ 0.84
SLC52A3Q9NQ40 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SLC52A3Q9NQ40 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.3■□□□□ 0.84
SLC52A3Q9NQ40 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC52A3Q9NQ40 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.3■□□□□ 0.84
SLC52A3Q9NQ40 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC52A3Q9NQ40 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.3■□□□□ 0.84
SLC52A3Q9NQ40 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC52A3Q9NQ40 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC52A3Q9NQ40 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.29■□□□□ 0.84
SLC52A3Q9NQ40 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.29■□□□□ 0.84
SLC52A3Q9NQ40 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SLC52A3Q9NQ40 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC52A3Q9NQ40 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.29■□□□□ 0.84
SLC52A3Q9NQ40 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC52A3Q9NQ40 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SLC52A3Q9NQ40 AC010141.3-201ENST00000456659 717 ntBASIC20.29■□□□□ 0.84
SLC52A3Q9NQ40 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.29■□□□□ 0.84
SLC52A3Q9NQ40 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SLC52A3Q9NQ40 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.29■□□□□ 0.84
SLC52A3Q9NQ40 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
SLC52A3Q9NQ40 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
SLC52A3Q9NQ40 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC52A3Q9NQ40 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC52A3Q9NQ40 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC52A3Q9NQ40 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC52A3Q9NQ40 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SLC52A3Q9NQ40 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
SLC52A3Q9NQ40 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC52A3Q9NQ40 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.28■□□□□ 0.84
SLC52A3Q9NQ40 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SLC52A3Q9NQ40 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC52A3Q9NQ40 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SLC52A3Q9NQ40 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC52A3Q9NQ40 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SLC52A3Q9NQ40 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
SLC52A3Q9NQ40 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC52A3Q9NQ40 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SLC52A3Q9NQ40 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.28■□□□□ 0.84
SLC52A3Q9NQ40 AC010525.1-201ENST00000585559 441 ntBASIC20.28■□□□□ 0.84
SLC52A3Q9NQ40 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.28■□□□□ 0.84
SLC52A3Q9NQ40 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SLC52A3Q9NQ40 FEM1AP1-201ENST00000431297 1995 ntBASIC20.28■□□□□ 0.84
SLC52A3Q9NQ40 LINC01006-201ENST00000333319 2292 ntBASIC20.28■□□□□ 0.84
SLC52A3Q9NQ40 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SLC52A3Q9NQ40 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.27■□□□□ 0.84
SLC52A3Q9NQ40 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms