Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
ZFYVE28Q9HCC9 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
ZFYVE28Q9HCC9 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
ZFYVE28Q9HCC9 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
ZFYVE28Q9HCC9 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
ZFYVE28Q9HCC9 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
ZFYVE28Q9HCC9 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
ZFYVE28Q9HCC9 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
ZFYVE28Q9HCC9 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC24.69■■□□□ 1.54
ZFYVE28Q9HCC9 ISCU-212ENST00000547005 795 ntTSL 3 BASIC24.69■■□□□ 1.54
ZFYVE28Q9HCC9 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
ZFYVE28Q9HCC9 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
ZFYVE28Q9HCC9 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
ZFYVE28Q9HCC9 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
ZFYVE28Q9HCC9 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC24.69■■□□□ 1.54
ZFYVE28Q9HCC9 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
ZFYVE28Q9HCC9 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC24.68■■□□□ 1.54
ZFYVE28Q9HCC9 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
ZFYVE28Q9HCC9 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
ZFYVE28Q9HCC9 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC24.68■■□□□ 1.54
ZFYVE28Q9HCC9 INO80E-214ENST00000620599 515 ntTSL 2 BASIC24.68■■□□□ 1.54
ZFYVE28Q9HCC9 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
ZFYVE28Q9HCC9 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
ZFYVE28Q9HCC9 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
ZFYVE28Q9HCC9 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
ZFYVE28Q9HCC9 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
ZFYVE28Q9HCC9 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC24.67■■□□□ 1.54
ZFYVE28Q9HCC9 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
ZFYVE28Q9HCC9 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
ZFYVE28Q9HCC9 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC24.67■■□□□ 1.54
ZFYVE28Q9HCC9 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
ZFYVE28Q9HCC9 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC24.67■■□□□ 1.54
ZFYVE28Q9HCC9 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC24.67■■□□□ 1.54
ZFYVE28Q9HCC9 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC24.67■■□□□ 1.54
ZFYVE28Q9HCC9 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC24.67■■□□□ 1.54
ZFYVE28Q9HCC9 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
ZFYVE28Q9HCC9 AC120498.10-201ENST00000621827 505 ntBASIC24.67■■□□□ 1.54
ZFYVE28Q9HCC9 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC24.67■■□□□ 1.54
ZFYVE28Q9HCC9 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
ZFYVE28Q9HCC9 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
ZFYVE28Q9HCC9 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
ZFYVE28Q9HCC9 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
ZFYVE28Q9HCC9 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
ZFYVE28Q9HCC9 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC24.66■■□□□ 1.54
ZFYVE28Q9HCC9 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
ZFYVE28Q9HCC9 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC24.66■■□□□ 1.54
ZFYVE28Q9HCC9 AC026366.1-201ENST00000488803 879 ntBASIC24.66■■□□□ 1.54
ZFYVE28Q9HCC9 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC24.66■■□□□ 1.54
ZFYVE28Q9HCC9 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC24.66■■□□□ 1.54
ZFYVE28Q9HCC9 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC24.66■■□□□ 1.54
ZFYVE28Q9HCC9 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
ZFYVE28Q9HCC9 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
ZFYVE28Q9HCC9 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
ZFYVE28Q9HCC9 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
ZFYVE28Q9HCC9 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC24.65■■□□□ 1.54
ZFYVE28Q9HCC9 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
ZFYVE28Q9HCC9 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
ZFYVE28Q9HCC9 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
ZFYVE28Q9HCC9 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC24.65■■□□□ 1.54
ZFYVE28Q9HCC9 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC24.65■■□□□ 1.54
ZFYVE28Q9HCC9 AL034346.1-201ENST00000568244 1277 ntBASIC24.65■■□□□ 1.54
ZFYVE28Q9HCC9 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC24.65■■□□□ 1.54
ZFYVE28Q9HCC9 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC24.65■■□□□ 1.54
ZFYVE28Q9HCC9 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC24.65■■□□□ 1.54
ZFYVE28Q9HCC9 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
ZFYVE28Q9HCC9 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
ZFYVE28Q9HCC9 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
ZFYVE28Q9HCC9 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
ZFYVE28Q9HCC9 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC24.64■■□□□ 1.54
ZFYVE28Q9HCC9 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
ZFYVE28Q9HCC9 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
ZFYVE28Q9HCC9 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.54
ZFYVE28Q9HCC9 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.54
ZFYVE28Q9HCC9 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC24.64■■□□□ 1.54
ZFYVE28Q9HCC9 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
ZFYVE28Q9HCC9 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC24.64■■□□□ 1.54
ZFYVE28Q9HCC9 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC24.64■■□□□ 1.54
ZFYVE28Q9HCC9 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC24.64■■□□□ 1.53
ZFYVE28Q9HCC9 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
ZFYVE28Q9HCC9 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
ZFYVE28Q9HCC9 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
ZFYVE28Q9HCC9 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC24.64■■□□□ 1.53
ZFYVE28Q9HCC9 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
ZFYVE28Q9HCC9 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC24.63■■□□□ 1.53
ZFYVE28Q9HCC9 AC010980.2-201ENST00000587099 1412 ntBASIC24.63■■□□□ 1.53
ZFYVE28Q9HCC9 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
ZFYVE28Q9HCC9 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
ZFYVE28Q9HCC9 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC24.63■■□□□ 1.53
ZFYVE28Q9HCC9 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC24.63■■□□□ 1.53
ZFYVE28Q9HCC9 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC24.63■■□□□ 1.53
ZFYVE28Q9HCC9 UNC93B5-201ENST00000530315 699 ntBASIC24.63■■□□□ 1.53
ZFYVE28Q9HCC9 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
ZFYVE28Q9HCC9 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC24.63■■□□□ 1.53
ZFYVE28Q9HCC9 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC24.63■■□□□ 1.53
ZFYVE28Q9HCC9 AC004812.2-201ENST00000611079 2094 ntBASIC24.63■■□□□ 1.53
ZFYVE28Q9HCC9 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
ZFYVE28Q9HCC9 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC24.62■■□□□ 1.53
ZFYVE28Q9HCC9 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
ZFYVE28Q9HCC9 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
ZFYVE28Q9HCC9 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC24.62■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms