Protein–RNA interactions for Protein: Q9HBD1

RC3H2, Roquin-2, humanhuman

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2Q9HBD1 BMP1-204ENST00000397814 836 ntTSL 4 BASIC23.03■■□□□ 1.28
RC3H2Q9HBD1 BET1L-204ENST00000410108 637 ntTSL 3 BASIC23.03■■□□□ 1.28
RC3H2Q9HBD1 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
RC3H2Q9HBD1 AC093787.1-201ENST00000450396 207 ntBASIC23.03■■□□□ 1.28
RC3H2Q9HBD1 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC23.03■■□□□ 1.28
RC3H2Q9HBD1 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC23.03■■□□□ 1.28
RC3H2Q9HBD1 AC092118.2-201ENST00000613495 667 ntBASIC23.03■■□□□ 1.28
RC3H2Q9HBD1 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
RC3H2Q9HBD1 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC23.03■■□□□ 1.28
RC3H2Q9HBD1 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
RC3H2Q9HBD1 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RC3H2Q9HBD1 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RC3H2Q9HBD1 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
RC3H2Q9HBD1 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RC3H2Q9HBD1 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RC3H2Q9HBD1 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
RC3H2Q9HBD1 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
RC3H2Q9HBD1 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RC3H2Q9HBD1 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
RC3H2Q9HBD1 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC23.02■■□□□ 1.28
RC3H2Q9HBD1 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
RC3H2Q9HBD1 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC23.02■■□□□ 1.28
RC3H2Q9HBD1 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC23.02■■□□□ 1.28
RC3H2Q9HBD1 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RC3H2Q9HBD1 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RC3H2Q9HBD1 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC23.01■■□□□ 1.27
RC3H2Q9HBD1 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RC3H2Q9HBD1 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RC3H2Q9HBD1 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC23.01■■□□□ 1.27
RC3H2Q9HBD1 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC23.01■■□□□ 1.27
RC3H2Q9HBD1 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC23.01■■□□□ 1.27
RC3H2Q9HBD1 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC23.01■■□□□ 1.27
RC3H2Q9HBD1 AL512625.2-201ENST00000417533 625 ntBASIC23.01■■□□□ 1.27
RC3H2Q9HBD1 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC23.01■■□□□ 1.27
RC3H2Q9HBD1 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC23.01■■□□□ 1.27
RC3H2Q9HBD1 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RC3H2Q9HBD1 AC093827.2-201ENST00000512654 315 ntBASIC23.01■■□□□ 1.27
RC3H2Q9HBD1 PHB2-213ENST00000546111 858 ntTSL 2 BASIC23.01■■□□□ 1.27
RC3H2Q9HBD1 DET1-205ENST00000558413 583 ntTSL 4 BASIC23.01■■□□□ 1.27
RC3H2Q9HBD1 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC23.01■■□□□ 1.27
RC3H2Q9HBD1 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RC3H2Q9HBD1 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RC3H2Q9HBD1 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RC3H2Q9HBD1 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RC3H2Q9HBD1 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RC3H2Q9HBD1 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RC3H2Q9HBD1 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RC3H2Q9HBD1 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC23■■□□□ 1.27
RC3H2Q9HBD1 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC23■■□□□ 1.27
RC3H2Q9HBD1 PRORSD1P-201ENST00000295112 541 ntBASIC23■■□□□ 1.27
RC3H2Q9HBD1 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RC3H2Q9HBD1 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC23■■□□□ 1.27
RC3H2Q9HBD1 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RC3H2Q9HBD1 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC23■■□□□ 1.27
RC3H2Q9HBD1 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
RC3H2Q9HBD1 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC23■■□□□ 1.27
RC3H2Q9HBD1 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC23■■□□□ 1.27
RC3H2Q9HBD1 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC23■■□□□ 1.27
RC3H2Q9HBD1 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC23■■□□□ 1.27
RC3H2Q9HBD1 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC23■■□□□ 1.27
RC3H2Q9HBD1 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC23■■□□□ 1.27
RC3H2Q9HBD1 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC23■■□□□ 1.27
RC3H2Q9HBD1 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC22.99■■□□□ 1.27
RC3H2Q9HBD1 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RC3H2Q9HBD1 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
RC3H2Q9HBD1 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RC3H2Q9HBD1 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RC3H2Q9HBD1 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
RC3H2Q9HBD1 RNA5SP413-201ENST00000516373 109 ntBASIC22.99■■□□□ 1.27
RC3H2Q9HBD1 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC22.99■■□□□ 1.27
RC3H2Q9HBD1 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC22.99■■□□□ 1.27
RC3H2Q9HBD1 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC22.99■■□□□ 1.27
RC3H2Q9HBD1 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
RC3H2Q9HBD1 MYC-209ENST00000641252 345 ntBASIC22.99■■□□□ 1.27
RC3H2Q9HBD1 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RC3H2Q9HBD1 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RC3H2Q9HBD1 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RC3H2Q9HBD1 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
RC3H2Q9HBD1 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC22.98■■□□□ 1.27
RC3H2Q9HBD1 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC22.98■■□□□ 1.27
RC3H2Q9HBD1 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RC3H2Q9HBD1 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RC3H2Q9HBD1 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC22.97■■□□□ 1.27
RC3H2Q9HBD1 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
RC3H2Q9HBD1 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC22.97■■□□□ 1.27
RC3H2Q9HBD1 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC22.97■■□□□ 1.27
RC3H2Q9HBD1 AC016405.3-201ENST00000607710 860 ntBASIC22.97■■□□□ 1.27
RC3H2Q9HBD1 AC083880.1-201ENST00000608266 535 ntBASIC22.97■■□□□ 1.27
RC3H2Q9HBD1 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC22.97■■□□□ 1.27
RC3H2Q9HBD1 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RC3H2Q9HBD1 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
RC3H2Q9HBD1 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
RC3H2Q9HBD1 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RC3H2Q9HBD1 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RC3H2Q9HBD1 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
RC3H2Q9HBD1 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC22.96■■□□□ 1.27
RC3H2Q9HBD1 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RC3H2Q9HBD1 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RC3H2Q9HBD1 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
RC3H2Q9HBD1 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC22.96■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms