Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
UPF2Q9HAU5 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
UPF2Q9HAU5 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
UPF2Q9HAU5 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
UPF2Q9HAU5 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC26.19■■□□□ 1.78
UPF2Q9HAU5 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
UPF2Q9HAU5 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC26.18■■□□□ 1.78
UPF2Q9HAU5 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC26.18■■□□□ 1.78
UPF2Q9HAU5 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC26.18■■□□□ 1.78
UPF2Q9HAU5 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC26.18■■□□□ 1.78
UPF2Q9HAU5 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC26.17■■□□□ 1.78
UPF2Q9HAU5 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
UPF2Q9HAU5 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
UPF2Q9HAU5 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
UPF2Q9HAU5 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
UPF2Q9HAU5 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
UPF2Q9HAU5 MTDHP2-201ENST00000601468 714 ntBASIC26.17■■□□□ 1.78
UPF2Q9HAU5 AC092028.1-203ENST00000608262 953 ntBASIC26.17■■□□□ 1.78
UPF2Q9HAU5 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
UPF2Q9HAU5 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC26.17■■□□□ 1.78
UPF2Q9HAU5 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC26.17■■□□□ 1.78
UPF2Q9HAU5 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
UPF2Q9HAU5 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC26.16■■□□□ 1.78
UPF2Q9HAU5 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC26.16■■□□□ 1.78
UPF2Q9HAU5 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
UPF2Q9HAU5 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC26.16■■□□□ 1.78
UPF2Q9HAU5 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC26.16■■□□□ 1.78
UPF2Q9HAU5 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC26.16■■□□□ 1.78
UPF2Q9HAU5 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
UPF2Q9HAU5 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
UPF2Q9HAU5 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
UPF2Q9HAU5 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC26.16■■□□□ 1.78
UPF2Q9HAU5 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC26.15■■□□□ 1.78
UPF2Q9HAU5 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
UPF2Q9HAU5 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
UPF2Q9HAU5 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
UPF2Q9HAU5 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
UPF2Q9HAU5 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
UPF2Q9HAU5 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
UPF2Q9HAU5 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
UPF2Q9HAU5 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC26.15■■□□□ 1.78
UPF2Q9HAU5 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
UPF2Q9HAU5 AC079089.2-201ENST00000531211 1277 ntBASIC26.15■■□□□ 1.78
UPF2Q9HAU5 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC26.15■■□□□ 1.78
UPF2Q9HAU5 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC26.15■■□□□ 1.78
UPF2Q9HAU5 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC26.15■■□□□ 1.78
UPF2Q9HAU5 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
UPF2Q9HAU5 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
UPF2Q9HAU5 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC26.15■■□□□ 1.78
UPF2Q9HAU5 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC26.14■■□□□ 1.78
UPF2Q9HAU5 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC26.14■■□□□ 1.78
UPF2Q9HAU5 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
UPF2Q9HAU5 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC26.14■■□□□ 1.78
UPF2Q9HAU5 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC26.14■■□□□ 1.78
UPF2Q9HAU5 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC26.14■■□□□ 1.77
UPF2Q9HAU5 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC26.14■■□□□ 1.77
UPF2Q9HAU5 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
UPF2Q9HAU5 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
UPF2Q9HAU5 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
UPF2Q9HAU5 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC26.13■■□□□ 1.77
UPF2Q9HAU5 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC26.13■■□□□ 1.77
UPF2Q9HAU5 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC26.13■■□□□ 1.77
UPF2Q9HAU5 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC26.13■■□□□ 1.77
UPF2Q9HAU5 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
UPF2Q9HAU5 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
UPF2Q9HAU5 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
UPF2Q9HAU5 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC26.13■■□□□ 1.77
UPF2Q9HAU5 CD72-202ENST00000378430 585 ntTSL 3 BASIC26.13■■□□□ 1.77
UPF2Q9HAU5 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
UPF2Q9HAU5 LINC01521-201ENST00000504184 1943 ntBASIC26.13■■□□□ 1.77
UPF2Q9HAU5 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC26.13■■□□□ 1.77
UPF2Q9HAU5 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
UPF2Q9HAU5 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC26.13■■□□□ 1.77
UPF2Q9HAU5 OR7E47P-201ENST00000546390 1422 ntBASIC26.13■■□□□ 1.77
UPF2Q9HAU5 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
UPF2Q9HAU5 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC26.12■■□□□ 1.77
UPF2Q9HAU5 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
UPF2Q9HAU5 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
UPF2Q9HAU5 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
UPF2Q9HAU5 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
UPF2Q9HAU5 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
UPF2Q9HAU5 KRT125P-201ENST00000546827 989 ntBASIC26.12■■□□□ 1.77
UPF2Q9HAU5 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
UPF2Q9HAU5 AL157384.1-201ENST00000445995 2473 ntBASIC26.12■■□□□ 1.77
UPF2Q9HAU5 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC26.12■■□□□ 1.77
UPF2Q9HAU5 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
UPF2Q9HAU5 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC26.11■■□□□ 1.77
UPF2Q9HAU5 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
UPF2Q9HAU5 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC26.11■■□□□ 1.77
UPF2Q9HAU5 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
UPF2Q9HAU5 TFPT-201ENST00000391757 774 ntTSL 5 BASIC26.11■■□□□ 1.77
UPF2Q9HAU5 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
UPF2Q9HAU5 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
UPF2Q9HAU5 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC26.11■■□□□ 1.77
UPF2Q9HAU5 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
UPF2Q9HAU5 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC26.11■■□□□ 1.77
UPF2Q9HAU5 MFF-203ENST00000349901 1716 ntTSL 2 BASIC26.11■■□□□ 1.77
UPF2Q9HAU5 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
UPF2Q9HAU5 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
UPF2Q9HAU5 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms