Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC31.66■■■□□ 2.66
SCAF1Q9H7N4 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC31.66■■■□□ 2.66
SCAF1Q9H7N4 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
SCAF1Q9H7N4 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
SCAF1Q9H7N4 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC31.65■■■□□ 2.66
SCAF1Q9H7N4 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC31.65■■■□□ 2.66
SCAF1Q9H7N4 LHPP-203ENST00000392757 840 ntTSL 3 BASIC31.65■■■□□ 2.66
SCAF1Q9H7N4 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC31.65■■■□□ 2.66
SCAF1Q9H7N4 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC31.65■■■□□ 2.66
SCAF1Q9H7N4 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC31.64■■■□□ 2.66
SCAF1Q9H7N4 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC31.64■■■□□ 2.66
SCAF1Q9H7N4 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC31.64■■■□□ 2.66
SCAF1Q9H7N4 AL121832.2-201ENST00000610979 668 ntBASIC31.64■■■□□ 2.66
SCAF1Q9H7N4 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
SCAF1Q9H7N4 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
SCAF1Q9H7N4 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
SCAF1Q9H7N4 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC31.63■■■□□ 2.65
SCAF1Q9H7N4 TBCB-214ENST00000629269 413 ntTSL 5 BASIC31.63■■■□□ 2.65
SCAF1Q9H7N4 SHD-204ENST00000599689 1729 ntTSL 5 BASIC31.63■■■□□ 2.65
SCAF1Q9H7N4 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC31.63■■■□□ 2.65
SCAF1Q9H7N4 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
SCAF1Q9H7N4 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
SCAF1Q9H7N4 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
SCAF1Q9H7N4 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC31.62■■■□□ 2.65
SCAF1Q9H7N4 AC004854.2-201ENST00000608450 1441 ntBASIC31.62■■■□□ 2.65
SCAF1Q9H7N4 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC31.62■■■□□ 2.65
SCAF1Q9H7N4 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
SCAF1Q9H7N4 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
SCAF1Q9H7N4 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC31.62■■■□□ 2.65
SCAF1Q9H7N4 AL138781.1-201ENST00000566567 1274 ntBASIC31.62■■■□□ 2.65
SCAF1Q9H7N4 GTSE1-AS1-202ENST00000623117 1518 ntBASIC31.62■■■□□ 2.65
SCAF1Q9H7N4 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
SCAF1Q9H7N4 AP004607.4-201ENST00000530158 1459 ntBASIC31.62■■■□□ 2.65
SCAF1Q9H7N4 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC31.61■■■□□ 2.65
SCAF1Q9H7N4 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
SCAF1Q9H7N4 DCD-201ENST00000293371 645 ntAPPRIS P3 TSL 1 (best) BASIC31.61■■■□□ 2.65
SCAF1Q9H7N4 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC31.61■■■□□ 2.65
SCAF1Q9H7N4 KRT18P29-201ENST00000397031 1267 ntBASIC31.61■■■□□ 2.65
SCAF1Q9H7N4 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
SCAF1Q9H7N4 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
SCAF1Q9H7N4 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC31.61■■■□□ 2.65
SCAF1Q9H7N4 AC083906.2-201ENST00000511578 360 ntBASIC31.61■■■□□ 2.65
SCAF1Q9H7N4 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC31.61■■■□□ 2.65
SCAF1Q9H7N4 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
SCAF1Q9H7N4 AC131274.2-201ENST00000580697 1507 ntBASIC31.61■■■□□ 2.65
SCAF1Q9H7N4 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC31.61■■■□□ 2.65
SCAF1Q9H7N4 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC31.61■■■□□ 2.65
SCAF1Q9H7N4 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC31.61■■■□□ 2.65
SCAF1Q9H7N4 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
SCAF1Q9H7N4 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC31.6■■■□□ 2.65
SCAF1Q9H7N4 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC31.6■■■□□ 2.65
SCAF1Q9H7N4 SLC6A10P-202ENST00000431994 2058 ntBASIC31.6■■■□□ 2.65
SCAF1Q9H7N4 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
SCAF1Q9H7N4 TSPY6P-201ENST00000448518 926 ntBASIC31.6■■■□□ 2.65
SCAF1Q9H7N4 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
SCAF1Q9H7N4 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
SCAF1Q9H7N4 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
SCAF1Q9H7N4 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC31.59■■■□□ 2.65
SCAF1Q9H7N4 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
SCAF1Q9H7N4 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC31.59■■■□□ 2.65
SCAF1Q9H7N4 MIR6089-201ENST00000616698 64 ntBASIC31.59■■■□□ 2.65
SCAF1Q9H7N4 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
SCAF1Q9H7N4 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
SCAF1Q9H7N4 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
SCAF1Q9H7N4 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC31.58■■■□□ 2.65
SCAF1Q9H7N4 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
SCAF1Q9H7N4 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC31.58■■■□□ 2.65
SCAF1Q9H7N4 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC31.58■■■□□ 2.65
SCAF1Q9H7N4 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
SCAF1Q9H7N4 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC31.58■■■□□ 2.65
SCAF1Q9H7N4 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC31.58■■■□□ 2.65
SCAF1Q9H7N4 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC31.57■■■□□ 2.64
SCAF1Q9H7N4 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
SCAF1Q9H7N4 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC31.57■■■□□ 2.64
SCAF1Q9H7N4 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC31.57■■■□□ 2.64
SCAF1Q9H7N4 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC31.57■■■□□ 2.64
SCAF1Q9H7N4 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
SCAF1Q9H7N4 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC31.57■■■□□ 2.64
SCAF1Q9H7N4 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
SCAF1Q9H7N4 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
SCAF1Q9H7N4 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC31.56■■■□□ 2.64
SCAF1Q9H7N4 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC31.56■■■□□ 2.64
SCAF1Q9H7N4 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
SCAF1Q9H7N4 MDK-213ENST00000617138 635 ntTSL 2 BASIC31.56■■■□□ 2.64
SCAF1Q9H7N4 AC105233.4-201ENST00000642045 216 ntBASIC31.56■■■□□ 2.64
SCAF1Q9H7N4 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
SCAF1Q9H7N4 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC31.56■■■□□ 2.64
SCAF1Q9H7N4 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC31.56■■■□□ 2.64
SCAF1Q9H7N4 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
SCAF1Q9H7N4 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
SCAF1Q9H7N4 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC31.55■■■□□ 2.64
SCAF1Q9H7N4 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
SCAF1Q9H7N4 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
SCAF1Q9H7N4 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC31.55■■■□□ 2.64
SCAF1Q9H7N4 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC31.55■■■□□ 2.64
SCAF1Q9H7N4 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC31.55■■■□□ 2.64
SCAF1Q9H7N4 AC069152.1-201ENST00000438030 544 ntBASIC31.55■■■□□ 2.64
SCAF1Q9H7N4 SPI1-203ENST00000533030 661 ntTSL 2 BASIC31.55■■■□□ 2.64
SCAF1Q9H7N4 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC31.55■■■□□ 2.64
SCAF1Q9H7N4 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC31.55■■■□□ 2.64
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms