Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PIF1Q9H611 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
PIF1Q9H611 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PIF1Q9H611 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.36■□□□□ 0.85
PIF1Q9H611 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PIF1Q9H611 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
PIF1Q9H611 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PIF1Q9H611 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PIF1Q9H611 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PIF1Q9H611 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.36■□□□□ 0.85
PIF1Q9H611 GUSBP5-201ENST00000418136 578 ntBASIC20.36■□□□□ 0.85
PIF1Q9H611 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.36■□□□□ 0.85
PIF1Q9H611 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PIF1Q9H611 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
PIF1Q9H611 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PIF1Q9H611 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PIF1Q9H611 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PIF1Q9H611 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.36■□□□□ 0.85
PIF1Q9H611 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PIF1Q9H611 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
PIF1Q9H611 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PIF1Q9H611 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PIF1Q9H611 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PIF1Q9H611 TSPY9P-201ENST00000440215 945 ntBASIC20.35■□□□□ 0.85
PIF1Q9H611 TSPY11P-201ENST00000442607 1045 ntBASIC20.35■□□□□ 0.85
PIF1Q9H611 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.35■□□□□ 0.85
PIF1Q9H611 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.35■□□□□ 0.85
PIF1Q9H611 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.35■□□□□ 0.85
PIF1Q9H611 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PIF1Q9H611 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PIF1Q9H611 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PIF1Q9H611 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PIF1Q9H611 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PIF1Q9H611 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
PIF1Q9H611 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PIF1Q9H611 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PIF1Q9H611 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.34■□□□□ 0.85
PIF1Q9H611 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
PIF1Q9H611 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PIF1Q9H611 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.34■□□□□ 0.85
PIF1Q9H611 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PIF1Q9H611 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PIF1Q9H611 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.34■□□□□ 0.85
PIF1Q9H611 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PIF1Q9H611 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.34■□□□□ 0.85
PIF1Q9H611 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.34■□□□□ 0.85
PIF1Q9H611 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.34■□□□□ 0.85
PIF1Q9H611 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.34■□□□□ 0.85
PIF1Q9H611 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PIF1Q9H611 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PIF1Q9H611 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
PIF1Q9H611 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PIF1Q9H611 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
PIF1Q9H611 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PIF1Q9H611 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PIF1Q9H611 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PIF1Q9H611 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PIF1Q9H611 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.33■□□□□ 0.85
PIF1Q9H611 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PIF1Q9H611 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PIF1Q9H611 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PIF1Q9H611 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PIF1Q9H611 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PIF1Q9H611 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.33■□□□□ 0.85
PIF1Q9H611 AC010997.5-201ENST00000609182 354 ntBASIC20.33■□□□□ 0.85
PIF1Q9H611 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.33■□□□□ 0.85
PIF1Q9H611 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PIF1Q9H611 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PIF1Q9H611 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PIF1Q9H611 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
PIF1Q9H611 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PIF1Q9H611 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PIF1Q9H611 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.32■□□□□ 0.84
PIF1Q9H611 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
PIF1Q9H611 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PIF1Q9H611 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.32■□□□□ 0.84
PIF1Q9H611 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
PIF1Q9H611 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
PIF1Q9H611 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PIF1Q9H611 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PIF1Q9H611 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PIF1Q9H611 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PIF1Q9H611 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
PIF1Q9H611 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PIF1Q9H611 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PIF1Q9H611 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PIF1Q9H611 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PIF1Q9H611 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PIF1Q9H611 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PIF1Q9H611 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PIF1Q9H611 AL499627.2-201ENST00000606283 725 ntBASIC20.31■□□□□ 0.84
PIF1Q9H611 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PIF1Q9H611 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PIF1Q9H611 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.31■□□□□ 0.84
PIF1Q9H611 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
PIF1Q9H611 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.31■□□□□ 0.84
PIF1Q9H611 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PIF1Q9H611 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PIF1Q9H611 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.3■□□□□ 0.84
PIF1Q9H611 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms