Protein–RNA interactions for Protein: Q9H3M9

ATXN3L, Ataxin-3-like protein, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3LQ9H3M9 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
ATXN3LQ9H3M9 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
ATXN3LQ9H3M9 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
ATXN3LQ9H3M9 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
ATXN3LQ9H3M9 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC22.49■■□□□ 1.19
ATXN3LQ9H3M9 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
ATXN3LQ9H3M9 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
ATXN3LQ9H3M9 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
ATXN3LQ9H3M9 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
ATXN3LQ9H3M9 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
ATXN3LQ9H3M9 DENND3-207ENST00000518347 850 ntTSL 2 BASIC22.48■■□□□ 1.19
ATXN3LQ9H3M9 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
ATXN3LQ9H3M9 MDK-213ENST00000617138 635 ntTSL 2 BASIC22.48■■□□□ 1.19
ATXN3LQ9H3M9 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
ATXN3LQ9H3M9 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
ATXN3LQ9H3M9 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
ATXN3LQ9H3M9 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC22.47■■□□□ 1.19
ATXN3LQ9H3M9 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC22.47■■□□□ 1.19
ATXN3LQ9H3M9 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC22.47■■□□□ 1.19
ATXN3LQ9H3M9 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
ATXN3LQ9H3M9 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC22.47■■□□□ 1.19
ATXN3LQ9H3M9 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
ATXN3LQ9H3M9 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
ATXN3LQ9H3M9 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC22.47■■□□□ 1.19
ATXN3LQ9H3M9 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
ATXN3LQ9H3M9 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
ATXN3LQ9H3M9 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC22.46■■□□□ 1.19
ATXN3LQ9H3M9 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC22.46■■□□□ 1.19
ATXN3LQ9H3M9 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
ATXN3LQ9H3M9 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC22.46■■□□□ 1.19
ATXN3LQ9H3M9 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
ATXN3LQ9H3M9 MAP2K4P1-201ENST00000438453 1195 ntBASIC22.46■■□□□ 1.19
ATXN3LQ9H3M9 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
ATXN3LQ9H3M9 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC22.46■■□□□ 1.19
ATXN3LQ9H3M9 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC22.46■■□□□ 1.19
ATXN3LQ9H3M9 MFSD11-216ENST00000590393 1141 ntBASIC22.46■■□□□ 1.19
ATXN3LQ9H3M9 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC22.46■■□□□ 1.19
ATXN3LQ9H3M9 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
ATXN3LQ9H3M9 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
ATXN3LQ9H3M9 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC22.46■■□□□ 1.19
ATXN3LQ9H3M9 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
ATXN3LQ9H3M9 LINC00526-201ENST00000581067 1875 ntBASIC22.45■■□□□ 1.19
ATXN3LQ9H3M9 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
ATXN3LQ9H3M9 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
ATXN3LQ9H3M9 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
ATXN3LQ9H3M9 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC22.45■■□□□ 1.18
ATXN3LQ9H3M9 SERP1-208ENST00000491660 830 ntTSL 2 BASIC22.45■■□□□ 1.18
ATXN3LQ9H3M9 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC22.45■■□□□ 1.18
ATXN3LQ9H3M9 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC22.45■■□□□ 1.18
ATXN3LQ9H3M9 AP001160.3-201ENST00000601484 763 ntBASIC22.45■■□□□ 1.18
ATXN3LQ9H3M9 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
ATXN3LQ9H3M9 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
ATXN3LQ9H3M9 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
ATXN3LQ9H3M9 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
ATXN3LQ9H3M9 PARP1-202ENST00000366792 553 ntTSL 3 BASIC22.44■■□□□ 1.18
ATXN3LQ9H3M9 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
ATXN3LQ9H3M9 MIR663A-201ENST00000385250 93 ntBASIC22.44■■□□□ 1.18
ATXN3LQ9H3M9 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC22.44■■□□□ 1.18
ATXN3LQ9H3M9 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC22.44■■□□□ 1.18
ATXN3LQ9H3M9 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC22.44■■□□□ 1.18
ATXN3LQ9H3M9 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC22.44■■□□□ 1.18
ATXN3LQ9H3M9 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
ATXN3LQ9H3M9 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC22.44■■□□□ 1.18
ATXN3LQ9H3M9 UBE2DNL-204ENST00000602536 740 ntBASIC22.44■■□□□ 1.18
ATXN3LQ9H3M9 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
ATXN3LQ9H3M9 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
ATXN3LQ9H3M9 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
ATXN3LQ9H3M9 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC22.43■■□□□ 1.18
ATXN3LQ9H3M9 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
ATXN3LQ9H3M9 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC22.43■■□□□ 1.18
ATXN3LQ9H3M9 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
ATXN3LQ9H3M9 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
ATXN3LQ9H3M9 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
ATXN3LQ9H3M9 FXN-202ENST00000396364 980 ntTSL 5 BASIC22.43■■□□□ 1.18
ATXN3LQ9H3M9 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
ATXN3LQ9H3M9 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC22.43■■□□□ 1.18
ATXN3LQ9H3M9 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC22.43■■□□□ 1.18
ATXN3LQ9H3M9 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC22.43■■□□□ 1.18
ATXN3LQ9H3M9 AC104771.1-201ENST00000603335 964 ntBASIC22.43■■□□□ 1.18
ATXN3LQ9H3M9 TERT-206ENST00000508104 2486 ntTSL 5 BASIC22.43■■□□□ 1.18
ATXN3LQ9H3M9 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
ATXN3LQ9H3M9 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
ATXN3LQ9H3M9 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC22.42■■□□□ 1.18
ATXN3LQ9H3M9 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC22.42■■□□□ 1.18
ATXN3LQ9H3M9 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
ATXN3LQ9H3M9 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
ATXN3LQ9H3M9 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
ATXN3LQ9H3M9 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC22.42■■□□□ 1.18
ATXN3LQ9H3M9 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC22.42■■□□□ 1.18
ATXN3LQ9H3M9 AL109923.1-201ENST00000618799 583 ntBASIC22.42■■□□□ 1.18
ATXN3LQ9H3M9 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC22.42■■□□□ 1.18
ATXN3LQ9H3M9 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
ATXN3LQ9H3M9 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
ATXN3LQ9H3M9 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
ATXN3LQ9H3M9 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
ATXN3LQ9H3M9 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
ATXN3LQ9H3M9 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
ATXN3LQ9H3M9 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
ATXN3LQ9H3M9 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
ATXN3LQ9H3M9 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms