Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
POLR2J3Q9H1A7 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
POLR2J3Q9H1A7 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
POLR2J3Q9H1A7 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
POLR2J3Q9H1A7 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.74■□□□□ 0.75
POLR2J3Q9H1A7 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
POLR2J3Q9H1A7 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
POLR2J3Q9H1A7 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
POLR2J3Q9H1A7 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
POLR2J3Q9H1A7 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.74■□□□□ 0.75
POLR2J3Q9H1A7 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
POLR2J3Q9H1A7 Z98882.1-201ENST00000622160 2253 ntBASIC19.73■□□□□ 0.75
POLR2J3Q9H1A7 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.73■□□□□ 0.75
POLR2J3Q9H1A7 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
POLR2J3Q9H1A7 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
POLR2J3Q9H1A7 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.73■□□□□ 0.75
POLR2J3Q9H1A7 DUX4L19-201ENST00000557448 1267 ntBASIC19.73■□□□□ 0.75
POLR2J3Q9H1A7 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
POLR2J3Q9H1A7 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.73■□□□□ 0.75
POLR2J3Q9H1A7 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
POLR2J3Q9H1A7 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
POLR2J3Q9H1A7 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
POLR2J3Q9H1A7 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.72■□□□□ 0.75
POLR2J3Q9H1A7 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.72■□□□□ 0.75
POLR2J3Q9H1A7 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
POLR2J3Q9H1A7 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.72■□□□□ 0.75
POLR2J3Q9H1A7 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
POLR2J3Q9H1A7 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
POLR2J3Q9H1A7 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.72■□□□□ 0.75
POLR2J3Q9H1A7 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.72■□□□□ 0.75
POLR2J3Q9H1A7 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
POLR2J3Q9H1A7 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
POLR2J3Q9H1A7 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
POLR2J3Q9H1A7 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
POLR2J3Q9H1A7 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
POLR2J3Q9H1A7 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
POLR2J3Q9H1A7 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
POLR2J3Q9H1A7 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
POLR2J3Q9H1A7 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
POLR2J3Q9H1A7 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
POLR2J3Q9H1A7 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
POLR2J3Q9H1A7 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
POLR2J3Q9H1A7 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
POLR2J3Q9H1A7 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.71■□□□□ 0.75
POLR2J3Q9H1A7 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.71■□□□□ 0.75
POLR2J3Q9H1A7 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
POLR2J3Q9H1A7 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
POLR2J3Q9H1A7 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
POLR2J3Q9H1A7 AL034346.1-201ENST00000568244 1277 ntBASIC19.71■□□□□ 0.75
POLR2J3Q9H1A7 AC104564.3-201ENST00000582367 638 ntBASIC19.71■□□□□ 0.75
POLR2J3Q9H1A7 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
POLR2J3Q9H1A7 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
POLR2J3Q9H1A7 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
POLR2J3Q9H1A7 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.7■□□□□ 0.74
POLR2J3Q9H1A7 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
POLR2J3Q9H1A7 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.7■□□□□ 0.74
POLR2J3Q9H1A7 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.7■□□□□ 0.74
POLR2J3Q9H1A7 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
POLR2J3Q9H1A7 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.7■□□□□ 0.74
POLR2J3Q9H1A7 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
POLR2J3Q9H1A7 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
POLR2J3Q9H1A7 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.7■□□□□ 0.74
POLR2J3Q9H1A7 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.7■□□□□ 0.74
POLR2J3Q9H1A7 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
POLR2J3Q9H1A7 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
POLR2J3Q9H1A7 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
POLR2J3Q9H1A7 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.7■□□□□ 0.74
POLR2J3Q9H1A7 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
POLR2J3Q9H1A7 OXCT2P1-201ENST00000447263 1535 ntBASIC19.7■□□□□ 0.74
POLR2J3Q9H1A7 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.7■□□□□ 0.74
POLR2J3Q9H1A7 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
POLR2J3Q9H1A7 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
POLR2J3Q9H1A7 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
POLR2J3Q9H1A7 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
POLR2J3Q9H1A7 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.69■□□□□ 0.74
POLR2J3Q9H1A7 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.69■□□□□ 0.74
POLR2J3Q9H1A7 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
POLR2J3Q9H1A7 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
POLR2J3Q9H1A7 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
POLR2J3Q9H1A7 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
POLR2J3Q9H1A7 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
POLR2J3Q9H1A7 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
POLR2J3Q9H1A7 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
POLR2J3Q9H1A7 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
POLR2J3Q9H1A7 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.68■□□□□ 0.74
POLR2J3Q9H1A7 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
POLR2J3Q9H1A7 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.68■□□□□ 0.74
POLR2J3Q9H1A7 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
POLR2J3Q9H1A7 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
POLR2J3Q9H1A7 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.68■□□□□ 0.74
POLR2J3Q9H1A7 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.68■□□□□ 0.74
POLR2J3Q9H1A7 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.68■□□□□ 0.74
POLR2J3Q9H1A7 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.68■□□□□ 0.74
POLR2J3Q9H1A7 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
POLR2J3Q9H1A7 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.67■□□□□ 0.74
POLR2J3Q9H1A7 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
POLR2J3Q9H1A7 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.67■□□□□ 0.74
POLR2J3Q9H1A7 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
POLR2J3Q9H1A7 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
POLR2J3Q9H1A7 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms